Dyadobacter fermentans: Dfer_2227
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Entry
Dfer_2227 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_2227
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_2227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
TTR_TEN1-4
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
ACT93449
UniProt:
C6VYU4
LinkDB
All DBs
Position
complement(2729890..2733429)
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AA seq
1179 aa
AA seq
DB search
MRKHCRPDTSSPDICGKIREPVLQKSLRENHKTIKGMKKHRLPVEIMIAMVKISCFHLFL
VMLTFSVSVAGDGFAQEMLTRPVTVTLVNQDVRAALTRIEKSAKVKFSYEPALLQKSGNV
SLVVHNEPLAAVLDKLLKPLGISYNSSGKYIILTREPGQGLRKQEGMEETEAFEKWVTGK
VSDESGAALPGVSILVKGTQTGTTTQADGTFRIDVGDSPASLIFSFVGYMPQEIEVGSRS
VMNVTLKVDTKALEEVVVVGYGTQKRSDLTGSVSTVKANEIKNLPVRSVNEALQGRAAGV
QVTRNDGSPGANSDIIIRGAGSIGGMAPLYIVDGIRMSAGNNFNLQDVESIEILKDASAA
AIYGAQAAGGVVLVTTKRGTSMDKMSINLNANYGVRKPVNLYKLLNTNDYYKAKTAFGVA
TGGWGDPASLPDTDWIDALYSNGVEQSYSLDLSGASAKSNYYISANYQKEGGTIIDNWFK
RYGLRTNSDYKLNSKLKVGETMYAWMTEINPTVSATYPFRSAPVVGIYDPSNSYGGWAKT
GSFFGGPNLVGQERQNHMSNQTYAVEGNVYADWQIIPALSFRATFGASVYNAKNLKFTEA
FDYGIIANRNAFLGRDINNQRNLTANFVLTYAQTFKQHEIKALAGYEAYKSDLSTLHGEA
QGFPYVTYNLGLTTNPASYVTNGAELPETRLLSQFGRINYTYSGKYLLTATVRRDGSDRF
GPANKWGVFPSASVGWKLSEEAFLRDNLPAVSNLKLRASYGKLGSTSNIPQYTYQSSYGG
SGGTNAMGLADGSRSKGYALTAQLVNENIRWESVLQTDVGVDVGLLRNALNITLDWYSRQ
TQGMIYRVPVAPTAGFGGTSVFTNIGQMSNKGLELAADYRGQKGDFTYSLAINAAYNKNL
VKQLDGNNNNPISDGVAGNDLDGNAGRTQVGNPMSQFYGYQVDGIFQSDAEVQSLNERVQ
QAAGSTAVYYQNPGTAAGDLRFRDVNGDGRITTLDKTFIGNPWPKLTYGLTLNLGWKGIE
LTALLQGMQGVDVYNGNKYYTEYFYGDHTSTRDILNSSFFNGNGLTDQPRVGATSASGAF
TRDPNSNYGRISSYFVEDGSFLKLRNLQIGYMFSSSQLKALHMQGLRIYAQGQNLFTLTK
YSGLDPEVLGRNGTTARGIDTIFSYPRSMLLSMGLSLSF
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaacattgccggcccgatactagctccccggacatctgtggcaagatcagggag
ccggttttgcaaaaatctttacgggaaaatcacaaaacgatcaaaggtatgaaaaaacat
cgactgcctgtcgagatcatgatagctatggttaaaatctcctgttttcatctttttctg
gtcatgctgacgttcagtgtcagtgtggccggcgatggctttgcacaggaaatgcttacg
cgcccggtgacggtgacgctcgttaaccaggacgtcagggcggccctgacgcggatcgag
aaatcggccaaagtaaagttcagctacgagcccgctctcctgcaaaaaagcgggaatgtg
agcctggttgtgcacaacgaaccccttgcagcagtgctggacaagctgctcaaaccgctg
ggaatcagttataattcatcgggaaaatacattatcctcacccgcgaacccggccagggc
ctgcgaaagcaggaagggatggaggaaacggaagcattcgaaaaatgggtgaccggaaaa
gtgagtgacgaatccggcgcggcattgcccggtgtgagcattctcgtgaaaggcacccaa
accgggaccaccacgcaggccgacggtacgttccgcatcgacgtgggcgacagtcctgca
tccctgatcttttcgtttgtaggctatatgccgcaggaaatcgaggtgggcagccgctcg
gtgatgaacgtgacattgaaagtggatactaaggccctggaagaggtggtggtggtgggc
tatggcacgcaaaagcgctccgacctcacaggctcggtgtcgaccgtgaaagcgaacgag
attaaaaacctccccgtaagaagtgtgaacgaggccttgcagggacgtgccgcaggcgtg
caggtcacgcgcaacgacggttcgccgggggctaattcggacattatcatccgcggggcg
gggtccatcggcggaatggcgccgctttacattgtggacggcatccggatgtcggcaggc
aataacttcaatttgcaggatgtggaatccatcgaaatcctgaaagacgccagcgcagca
gccatttacggcgcacaggcggcaggcggcgtggtgctggttacgaccaagcgcggcacg
tcgatggacaagatgagcattaacctcaatgcgaactacggagtgagaaagcccgtgaat
ttgtacaaattattgaataccaatgattattacaaagccaagaccgcttttggcgtggct
accggcggctggggagaccccgcatcgctgccggataccgactggatcgacgcactttat
tccaacggcgtggagcaaagctattcgctcgacttgtcgggcgcttcggccaagagcaat
tactacatttccgccaattaccagaaggaaggcggcacgatcattgataactggttcaaa
cgctacggtttaaggacgaattcggattacaagctcaattcgaaactgaaagtaggggag
acgatgtacgcctggatgacggagatcaatccgaccgtgagcgccacatacccgttccgt
tcggcgccggtggtgggcatttacgacccttccaacagctacggcggctgggccaaaacg
ggcagctttttcggcggacctaacctcgtggggcaggagcggcaaaaccacatgtcgaac
caaacgtacgccgtcgagggcaatgtgtatgccgactggcagatcattccggcgctcagc
tttcgtgccacattcggggcatcggtgtacaacgcgaagaacctgaaattcacggaggca
ttcgattacggcattattgccaaccgcaatgcgtttctgggccgggatatcaacaaccag
cgcaacctcaccgccaacttcgtgcttacctacgcccaaacattcaagcagcacgaaatc
aaggcgcttgcgggatatgaagcttacaaatccgaccttagtacattgcacggcgaggcg
cagggatttccgtatgtgacttataatctggggttaacgaccaatcccgccagctatgtg
accaacggcgccgagctgccggaaacgcgtctgctgtcgcagttcgggcggatcaattat
acctattcgggtaaatacctgctcacggcgacggtccgccgcgatggctccgaccgcttt
ggcccggccaacaaatggggcgtgtttccatcggcatcggtgggctggaagctcagcgag
gaggcatttttgcgggataacctgcctgcggtgtcgaacctgaaactgcgggcgagttat
ggcaaactgggcagcacgagcaacattccgcaatatacctaccagtcgtcgtacggcggc
agcggcggtaccaatgccatgggcctggccgacggttcccgttcgaaagggtacgcgctc
acggcccagctcgtgaacgaaaacatccgttgggaatccgtattgcagaccgacgtcggc
gtggatgtggggctgctccgcaatgcattgaacatcacgctcgattggtacagccgccag
acccaggggatgatctaccgggtgcccgtagcgcccacggccggcttcgggggcacatcg
gtttttaccaatatcggccagatgagcaacaaaggcctcgaactcgccgccgattaccgg
gggcaaaagggagattttacctactcgctggccatcaatgcagcctacaacaagaatctc
gtgaaacagctggacgggaataacaacaatccgatcagcgacggggtggcgggcaacgac
ctcgacggcaatgccggacggacgcaggtgggcaacccgatgagccagttttacggctac
caggtcgacggcattttccaaagcgacgccgaagtccaatccctgaacgaaagggttcag
caggcagcgggatcaaccgcggtttactatcagaacccgggcacggcggcgggcgacctg
cgtttcagggatgtgaatggcgacgggcgcattaccacgctcgacaaaacgttcatcggc
aacccctggccgaaactcacctatggcctcacgctcaacctgggctggaaaggcatcgaa
ctcaccgcgttgctgcaaggcatgcagggagtggatgtgtacaacggcaacaagtactac
accgagtatttctacggcgatcacacctcgacccgcgacatcctgaactcttcgttcttc
aacggcaacggccttaccgaccagccgcgggtaggggccacgtcggcgtcgggcgcattc
acgcgcgacccgaactcgaattacgggcgcatttcgagctatttcgtggaggacggctcg
ttcctgaaactccggaacctgcaaatcggctacatgttttccagcagtcagctgaaagca
ttgcatatgcaggggctgcgcatttacgcgcaggggcagaatctgtttacactcacgaag
tactcgggcctcgatcccgaagtgctcgggcgtaacgggaccacggcgcggggcatcgac
acgattttctcctacccgcgttcgatgctgctttcgatgggtctcagtctcagtttctaa
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