Dyadobacter fermentans: Dfer_2502
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Entry
Dfer_2502 CDS
T00970
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfe03016
]
Dfer_2502
Enzymes [BR:
dfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Dfer_2502
Transfer RNA biogenesis [BR:
dfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dfer_2502
Prokaryotic type
Dfer_2502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACT93720
UniProt:
C6W1J0
LinkDB
All DBs
Position
complement(3080442..3081188)
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AA seq
248 aa
AA seq
DB search
MRYFIEFSYRGTAYNGWQKQNNALGVQEVLEAALAKVLRAPVEVTGSSRTDAGVHAEQQF
AHFDLPAAIPDVDLMVYKLNALVPKDIAVQRLIPVAEDVHSRFAATHRKYEYRITFQKNP
FLTDLATQMRRNLDVPRMNEAAALLLAHNDFESFSKIHTNVNNFRCTITESRWVEVGEML
VFHVKANRFLRGMVRALVGTMLEVGRQKITVDDFEQIILSRNRKNAGAQAPAEGLFLVEV
GYPASLLG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatttcatcgaattcagttaccgcggtacggcctacaacggctggcagaaacaa
aacaacgcattgggcgtccaggaagtgctggaagcggcccttgccaaagtgctccgggca
ccggtggaggttaccggcagcagccgtaccgatgcgggtgttcatgcagaacaacaattc
gcccattttgatttgccggcggcaatcccggatgtggatttaatggtttataaattaaat
gcgctggttccgaaagacattgccgtccagcgactcattcccgttgctgaggatgtgcat
tcccgcttcgcagccacgcaccggaagtacgaataccgcattacctttcaaaagaacccg
tttctgacggatctggcaacgcaaatgcggcgcaatctggacgtaccccgcatgaatgaa
gccgcggcactgctgctggctcacaacgatttcgagagtttcagcaagatccacaccaat
gtgaacaatttccgctgcaccatcaccgagtcgcgttgggtcgaggtcggggaaatgctg
gtatttcatgtcaaggcgaaccgttttctgcgcggcatggtgcgggcgctggtaggcacg
atgctcgaagtagggcgccagaaaattacggtggacgattttgaacagattatcctctcc
cgtaaccgaaaaaatgccggagcacaggccccggcagaaggtttgttcctcgtggaagta
ggttacccggcgtcgttgctgggctga
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