Dyadobacter fermentans: Dfer_2662
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Entry
Dfer_2662 CDS
T00970
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Dfer_2662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfe03016
]
Dfer_2662
Enzymes [BR:
dfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Dfer_2662
Transfer RNA biogenesis [BR:
dfe03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Dfer_2662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
DUF7411
Arginosuc_synth
ThiI
ATP_bind_3
NAD_synthase
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
ACT93879
UniProt:
C6W2M5
LinkDB
All DBs
Position
complement(3286003..3287109)
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AA seq
368 aa
AA seq
DB search
MSKHGRILVAMSGGIDSSLAAVLLHEQGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN
DARNIAVELGFPHYILDIRAEFGDYVIDHFTGEYLEGRTPNPCVLCNTHIKWDALLRRAD
RLDCEFIATGHYANMQFNNGRHYVSKGIDAWKDQSYVLWGVSQESLARTKLPLGYLHKAE
IREMARERGFIDLVNKSESYEICFVPDNDYRGFLKRRIPGLEAEVAGGNFVYADGTIVGK
HEGYPFYTVGQRKGLGIALGRPVFVTEIRKDTNEVVLGDMPDLFRDGMNVSKLNLQKYAS
IEKPLETITKVRYKHDGTPALIEQTGPDQIVARFHDGVNGIAPGQAAVFYEGDDVVGGGW
IMKSFRQE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacacggacgcattctcgtcgccatgagcggcggcatcgacagctcgctggca
gctgttcttctccacgaacaaggttatgaggtcatcggtatgaccatgaaaacctgggat
tacgccagcagcggcggtaccaagaaagaaaccggatgctgttcgctggattccatcaac
gacgcacgtaatatcgcggtagagctcggttttccgcattatattctcgacatccgcgcc
gagtttggtgactacgtgatcgaccatttcacaggcgagtacctggaaggccgcacgccg
aacccctgcgtgctttgtaatacccacatcaaatgggacgcattgctccgccgcgccgac
cggctcgattgcgagtttatcgctaccgggcattatgccaatatgcagttcaataacggc
cgccattatgtttccaaggggatagatgcctggaaagatcaaagctatgtgctatggggt
gtgtcgcaggaaagcctggcgaggaccaaactgccgctggggtatctgcataaagcggag
atccgcgaaatggcgcgtgaaagaggttttattgacctcgttaataaatctgaaagctac
gaaatctgtttcgtgccggataacgactaccgcggcttcctgaaaagacgcattcccgga
ctggaagcggaagtagcaggaggtaacttcgtttacgcggacggcaccattgtcggcaag
catgaaggctatccgttctacaccgtcggccagcgcaaaggcctcggcattgcattaggc
cgcccggttttcgtgacggaaataaggaaagataccaacgaagttgtgctcggcgacatg
cccgaccttttccgcgacggcatgaatgtgagcaaattgaaccttcaaaaatacgcatcc
atcgaaaagccgctggaaactatcaccaaagtacgctacaaacacgacggcaccccggcg
ctcatcgagcaaaccggccccgaccaaatcgtagcccgcttccacgacggcgtaaacggc
atcgcgccgggacaggcagccgtgttctatgaaggcgacgatgttgtaggcggcggctgg
atcatgaagagttttcggcaggagtga
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