Dyadobacter fermentans: Dfer_2983
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Entry
Dfer_2983 CDS
T00970
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dfer_2983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_2983
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dfer_2983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACT94198
UniProt:
C6W5I0
LinkDB
All DBs
Position
complement(3648857..3651451)
Genome browser
AA seq
864 aa
AA seq
DB search
MAKAHKETPLNKQYNQIKAKYPGALLLFRVGDFYETFGEDAVRASKILGIVLTRRNNGGA
HEELAGFPHHSLDNYLPKLVRAGERVAICDQLEDPAAAKGIVKRGVTELVTPGVSFNDNV
LDIRKNNYLAAVHVGSDGLYGIAFLDISTGEFMASQGNAAYIDKMLQGFGPAEVLYCKKH
KQEFNELFGGKYHTFHLEDWCFGYDYGYEQLTGHFQTTTLKGYGVESLPLGIIAAGVVLH
YLRETEHKEVAHISRITRLEEEKYVWLDRFTVRNLELVYAQQEGGVPLIDILDHTVTPMG
ARQLRKWMVLPLKDKAPIEERLSAVEHFLASEELHESLVGYFKQIGDLERLISKVAVRRI
NPRELVQLKKSLKQVAPVKQLLAGGILDKFASQLDACGALVEKIDKELRDDAPVLSNQGR
MVQSGVDSELDELHAISYEGKDYLIKLQNREIERTGISSLKIAYNKVFGYYLEVTHAHQS
KVPADWIRKQTLVNAERYITPELKEYEEKIMNAEDRISAIEFRIFSELVQKAAEFVGAIQ
QNALVISALDVLSSFALAARKNKYAKPVISEGNELDIKEGRHPVIEQQLPVGESYVPNDV
YLDDSSQQIIIITGPNMAGKSALLRQTALIVLMAQMGSFVPARSATVGIVDKVFTRVGAS
DNLSRGESTFMVEMTETASILNNLSSKSLVLMDEIGRGTSTYDGVSIAWAITEYLHNQSD
CRPKTLFATHYHELNQLAEDFPRIKNFNVAVKEVDNKVVFLRKLKPGGSAHSFGIHVAQI
AGMPQPIVLRASEIMQHLEKDHVAHEHKKRVKDIPKNNFQLSIFEPADPRLDELKEKLLL
VDVNTLSPIEALLKLNEFQKLIKK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggcacacaaagaaactccgcttaataaacaatacaatcagatcaaagccaag
taccccggagcactgctgcttttccgggtcggcgatttttatgagactttcggagaggat
gccgtaagggcttccaagattctcggcatcgtactcacgcgtcgcaacaatggcggtgcg
catgaggagctggccggttttccgcaccattcactggataactatcttcccaagctcgtc
cgtgccggcgagcgcgtggccatttgcgaccagctcgaagatcccgccgcagccaaaggc
atcgtgaaacggggcgtaaccgaattggtaacgcccggcgtgtcgttcaacgacaatgtg
ctggacatccgcaaaaataattacctggccgccgtgcacgtcggctccgatgggctgtac
gggatcgcgttcctcgatatttcgacgggcgagtttatggcctctcagggcaatgcggct
tacattgataaaatgttgcagggctttggtcccgcggaggtgctgtattgcaaaaagcat
aagcaggaatttaacgaacttttcggcggtaaataccatacttttcacctcgaagactgg
tgctttggctacgattacggctacgagcagctcacggggcattttcagaccacaaccctg
aaaggttacggcgtggaatcactgccgctgggtattatcgcggcgggcgttgtcctgcat
tacctgcgcgaaaccgagcataaggaagtggcgcacattagccgcattacccggctcgaa
gaagagaaatacgtgtggctcgaccgtttcaccgtccgcaacctcgaactcgtatatgcc
cagcaggaaggcggtgtgccgctgatcgacatcctcgatcacacggttacacctatgggt
gcgaggcagttgcggaaatggatggttctgcctttgaaagacaaggcgccgatcgaagag
cgcctgagtgccgtggagcatttcctcgcaagtgaggaattacacgagtcgctggtgggc
tatttcaaacagatcggtgatctggaacggcttatttccaaagtggcggtgcggcgtatc
aatccgcgtgaactggttcagcttaaaaagtccctgaaacaggttgcgccggtgaaacaa
ctgctagcgggcggtatcctggacaagtttgcttcccagctcgatgcctgcggggcattg
gttgaaaagatagataaggagctgcgcgacgacgcgccggtgctgtcgaaccagggccgg
atggtccagagcggggtggacagcgagctcgacgaactgcacgccatttcttacgaaggg
aaggattacctgatcaaactccaaaaccgggagatagagcggacgggtatcagctcgctc
aaaatcgcctataacaaggtttttggctattacctggaagttacgcacgcacaccaaagc
aaggtgcctgcggactggatcaggaaacagacgctcgtaaatgccgaacgatacatcacg
cccgagctcaaagaatacgaagagaagatcatgaatgccgaagaccgcatttccgcgatc
gagttcaggattttcagtgaattggtgcaaaaagcagccgagtttgtaggtgccatccag
cagaatgctttggtaatttcggccctcgatgtgctaagctcgtttgcattggcagcgcgt
aaaaacaagtatgcaaagccggtgatcagcgaaggcaatgagctggatatcaaagaaggc
cggcatccggtgatcgagcagcagctgcccgtgggcgaaagctacgtgccgaacgacgtt
tacctggacgattcgagccagcagatcatcatcatcaccggtccgaacatggccggtaag
tccgcattgctgcgccaaacggcgctgatcgtgctcatggcgcaaatgggttcattcgtc
cccgccagatcggcgaccgtcggcattgtcgacaaagtgtttacaagggtgggagcgagc
gacaacctgagccgtggcgagagtacctttatggtcgaaatgaccgaaaccgccagcatt
ctcaataacctgagcagtaaaagcttggtattaatggatgaaatcggccggggaacgagc
acctacgatggcgtttccattgcctgggccattaccgaataccttcacaaccaatccgat
tgccggcccaaaacgcttttcgcgacgcattaccacgagctgaaccagctggcggaggac
ttcccgcgcatcaaaaactttaatgtagccgtaaaggaggtggacaacaaggtggtgttc
ctgcgcaagctgaaacctggcggcagcgcgcacagtttcggtatccacgtggcgcaaatc
gccggtatgccgcagcctatcgtgttacgtgcgagcgaaatcatgcagcatctggaaaag
gaccacgtggcgcacgagcacaagaagcgtgtgaaggacattcctaaaaacaatttccag
ctcagcattttcgagccggccgatccgcgtttggacgagctgaaagaaaagctgctgctg
gtggacgtaaacacactgtcgcccattgaagcacttctgaaactaaacgagtttcagaaa
ctgatcaagaaataa
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