Dyadobacter fermentans: Dfer_3084
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Entry
Dfer_3084 CDS
T00970
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Dfer_3084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_3084
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Dfer_3084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ACT94299
UniProt:
C6W6F9
LinkDB
All DBs
Position
3772232..3773086
Genome browser
AA seq
284 aa
AA seq
DB search
MIASAQRHLATFKAQILLSPNFQNEKNMRAIWSGAIGFGLVNIPVKLFSAVQASELDLDM
LDKKDHANIHYQRVNANTGREVKWENIVRGYKVEDNYVVLDESDFEKASPEKTKIIEIAE
FVDEKEIDSIYYETPYYLQPEKSGAKPYALLRDALKKTGKCGLGSYVLRNRESLVLIKPQ
GDLLILNKIRFADEIRDTDELNIPDVKIKPAEMNMAVQLIEQLTTEFDISNYKDTYNEKL
LKLIMAKAKGKKPAASKMKVVHSKSRDLMAQLKESLSAPKRKAS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcatcggcccagcggcatttggcgacattcaaggcacagattttgctctcaccc
aattttcaaaacgaaaagaatatgagagcaatatggtccggggcgatcgggttcggcctc
gtcaatatccccgtcaaacttttcagcgccgtgcaagccagcgagctcgacctcgatatg
ctggataaaaaagaccacgcaaacatccattaccagcgcgtaaatgccaacacgggccgc
gaggtgaagtgggagaacattgtgcgcggatataaggtggaggacaattatgtggtactc
gatgaaagcgattttgaaaaggccagtcccgaaaaaacgaaaatcatcgaaatcgcggag
tttgtcgatgagaaggaaatcgacagcatttactacgaaacaccctattacctccaaccc
gaaaagtcgggtgcgaaaccctatgcattgctgcgcgacgcgctcaaaaaaaccggcaaa
tgcggcctcggcagttatgtgctgcgtaaccgcgagagcctggtgctgattaaaccacag
ggcgacttgctgatcctcaacaaaatccgcttcgccgacgaaatccgcgataccgacgag
ctcaatattcccgatgtgaagattaagccggccgaaatgaatatggccgtccagctgatc
gagcagctcactaccgaattcgatatttcaaattacaaagacacctataatgaaaagttg
ctgaaactgatcatggccaaggcaaaaggcaagaaaccggcggccagcaaaatgaaggtc
gttcattcgaaaagccgtgacctgatggcgcaattgaaagaaagcctctcggcccccaaa
agaaaagcatcatga
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