Dyadobacter fermentans: Dfer_3315
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Entry
Dfer_3315 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K16092
vitamin B12 transporter
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_3315
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_3315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACT94526
UniProt:
C6VS05
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All DBs
Position
4060155..4062107
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AA seq
650 aa
AA seq
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MKLHYLSITFFLSCIASPGLAQEISLDPVTVTSSLVEKRASQTGRNIAVIKGEYFQQLPV
HSIDDLLRYVPGVEIQARGPQGSQSDIVLRGGTFQQVLVILDGIRLNDPNTGHFNSYIPI
SPAEIDRIEVLKGASSALYGSDAVGGVVHVISKTFAARLAGAGTDNAVQKTQVNGGVSAG
EYGLFNANVGAFVQRNKLAVSGGFLSNNASGVQQRGIKGYFHNNTASLSLSYAISPSWNL
SIRSAYDHRDFAAQNFYTVLKSDTASEKVKMSWNQVRLSYQKNKTAFSVDGGFKSVQDTY
LFNPHSIANSSKSKLWQGLATLQQGLTASTNLIAGVNFQQRNIRSNDRGNHTLNQLAPFV
SVVQTIGEHFTVTPSARLDWRENIGTEVSPQINLSYKKSNWQLRASAGKTIRDADFTERF
NNYAKTLVTGGSVGNPDLKAERSISYEAGADWFLTSNPTAQLKISGTFFQRLQKDLIDYV
TTPYAQMPRKDNLSPTGTFGLALNIAEVNTTGFELDIQSANAISDNQKLLLNAGLTWLDS
DNKSNIQSFYLSSHARFLANFSAIYQVGAFSVSVNGLYKKRAEREASAIEATISKNYFLL
NARAEYAFLKRQLGVFVQADNAFDKQYSDVLGSVMPGRWLMGGVRFSFSK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacattacctcagcatcaccttctttctgtcttgcattgcgagccccggcctc
gcgcaggaaatatcgctcgaccctgttaccgtcacctcgtcgctcgtcgaaaagcgcgcc
tcgcagaccggccgcaacattgccgtcatcaaaggcgaatactttcagcaactgcccgtc
cacagcatcgacgacctgctccgctacgtgccgggcgtggaaatccaggcgcgcggcccg
caaggttcgcagagtgacattgtgctgcgcggcggcacgttccagcaggtgcttgtgatc
ctcgacggcattcgcctgaacgacccgaacacaggccattttaatagctacattcccatc
tccccggccgaaatcgaccggatcgaggttttgaaaggcgcttcatccgcattgtacggt
tccgatgccgtcggcggggttgttcatgttatttcaaagacatttgcggcgcggcttgcc
ggcgcaggaacggataatgctgtacaaaaaacgcaagttaacggcggcgtgagcgctggg
gaatatgggctgtttaatgccaatgtgggcgcatttgtacagcggaacaagctggcggtt
tccggaggatttttgtccaacaatgcctcaggcgtgcagcagcggggcattaagggctat
tttcacaataatacggcctcattatcgctgagctacgcgatttctccgagctggaaccta
tccatccgcagtgcctacgaccaccgcgattttgccgcgcagaacttttacaccgtgctc
aaatccgacaccgcgagcgaaaaagtgaaaatgtcgtggaaccaggtgcggctgagttac
cagaaaaacaagacggcattttcggtagacggtggatttaaatcggtgcaggacacctat
ttgttcaacccgcattccattgccaacagcagtaaatcgaagctctggcaggggctggct
actttgcagcagggcctcaccgccagcacgaacctgatcgccggcgtcaactttcagcag
cgtaatatccggtccaacgaccgcggcaatcacacattgaaccagctcgcaccattcgtt
tcggtggtacaaacgatcggggagcattttacagtgacaccttccgcccgcctggattgg
cgcgaaaacattggcaccgaagtttcgccccaaatcaatttatcctacaaaaaatcgaac
tggcagctgcgggcgagtgcaggaaaaaccattcgcgacgccgatttcacggaacggttt
aacaactacgccaaaacgctcgtcaccggcggcagcgtcggcaaccccgacctgaaagcc
gagcgctcgatcagctacgaagccggcgccgactggttcctgaccagcaacccgacggct
cagctcaaaatttcaggcacgtttttccagcgccttcaaaaagacctgatcgactacgtc
accacaccatatgcacaaatgccccgcaaggataacctctcgccaactggcacattcggc
cttgcattgaacatcgccgaagtaaacacgaccggctttgagctcgatattcaatcggcc
aatgcgatttcggataatcagaaactgctcctcaacgcaggccttacctggctcgatagc
gacaataaaagcaatatccagtctttctacctctcgtcacacgcccgtttccttgccaat
ttctcggccatttaccaggtcggcgcattctcagtgagtgtgaatggtttgtacaaaaaa
cgggcagaacgggaagcatcggccatcgaagccacgatttctaaaaactactttttgctg
aatgcacgcgccgaatatgcgtttctgaaacgtcagctgggtgtgttcgtgcaggccgat
aatgcattcgacaagcaatacagcgatgtgctcggctcggtaatgcccggtcgctggttg
atgggcggcgttcgtttcagcttttcaaaatag
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