Dyadobacter fermentans: Dfer_3319
Help
Entry
Dfer_3319 CDS
T00970
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfe03009
]
Dfer_3319
Enzymes [BR:
dfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Dfer_3319
Ribosome biogenesis [BR:
dfe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dfer_3319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACT94530
UniProt:
C6VS09
LinkDB
All DBs
Position
complement(4064332..4065009)
Genome browser
AA seq
225 aa
AA seq
DB search
MIVHLGMVPHRYFIINKPPNMVSQFVSSHDVRLLGELDFDFPEGTHAVGRLDSMSEGLLI
LTTNKKVTNLLFLGEVPHTRTYWVNVGHIVPPETVQLLRTGIPIRVKGGGYYTTAPCEVE
VIERPAILPWHQSEGQPGVPNTWLSITLTEGKYHQVRKMVREANHRCKRLVRASIEDLEL
GDLPPGGVREIGEEEFFRLLKIDNWKSVISSGDLRLEPSVENQAY
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtacatttgggcatggtaccacaccgctacttcattatcaacaagccacccaac
atggtttcgcagttcgtcagctcgcatgatgtgcggttgctgggggagctggattttgat
tttccagaaggtacgcacgccgtggggcggctcgatagcatgtcggaagggctgctgatc
ctgactaccaacaaaaaagttaccaacttgcttttcctgggcgaagtgccgcatacccgg
acgtactgggtgaatgtgggccatatcgtgccaccggagacggtgcagttgctgcggacg
ggcattcctatccgcgtgaagggtggcggttattacacaacagcgccctgcgaggtggag
gtcatcgaacgcccggcgattttgccctggcatcaaagcgaaggccagcccggtgtgccc
aacacctggctgagcattaccctcaccgaaggcaaataccaccaggttcgcaaaatggtg
cgggaggcgaatcaccgctgtaaacgcctcgtccgggccagtatcgaggatttggaactc
ggcgatctgccgccgggaggggtgagggaaatcggggaggaggagtttttcagattgctg
aaaatagacaactggaagtcagtgatttcgtccggcgatttgcgcctggaaccgtctgtc
gaaaatcaggcatactag
DBGET
integrated database retrieval system
