KEGG   Dyadobacter fermentans: Dfer_3390
Entry
Dfer_3390         CDS       T00970                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dfe  Dyadobacter fermentans
Pathway
dfe02024  Quorum sensing
dfe03060  Protein export
dfe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Dfer_3390
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dfer_3390
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dfer_3390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dfe02044]
    Dfer_3390
Enzymes [BR:dfe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Dfer_3390
Secretion system [BR:dfe02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Dfer_3390
  Eukaryotic Sec-SRP protein
   Dfer_3390
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 nSTAND3 AAA_30 KTI12 AAA_16 APS_kinase KAP_NTPase AAA_18 NTPase_1 cobW SRPRB AAA_17 Thymidylate_kin YqeC ATPase_2 AAA_31 ParA ATP_bind_1 MMR_HSR1 FtsK_SpoIIIE ATPase AAA_33 ABC_tran NACHT DO-GTPase1 AAA_14 MobB Fer4_NifH NPHP3_N ArsA_ATPase
Other DBs
NCBI-ProteinID: ACT94600
UniProt: C6VSV5
LinkDB
Position
4146073..4147395
AA seq 440 aa
MFENLQDKLNNAFRTLKGKDRISDINVAATTKEVRKALVDADVNFKVAKEITDRIREKAI
DRKILISVEPGQMFVKIVQEELTELMGGNAEGINIKGDPAVILIAGLQGSGKTTFSGKLA
SLLKKQGRQVLLTACDVYRPAAIDQLKVLGEQIGVEVYSEPENKNAVSIAQNAVSHAKKS
GKKIVIVDTAGRLAVDEVMMKEVEDIKTSVKPSEILFVVDSMTGQDAVNTAKTFNERLDF
DGVVLTKLDGDARGGAALSIRQVVEKPIKYISTGEKMEALDSFYPDRMASRILGMGDVIS
LVERAQQAFDEDEAKRINAKMRQNKFDFDDFLGQLQQIKKMGNVKDLIGMIPGMGSAIKN
LDIDNESFKPIEAIIQSMTKKERENPDIIDGSRKKRIAAGSGTTILQVNNLIKQFDEMRK
MMKKMNTMQAAGKLGKAMRR
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtttgaaaacttacaggacaagcttaataacgcctttcgcacactaaaaggaaaggac
aggatatccgatataaatgttgccgccaccaccaaggaagtccgcaaagcgctggttgat
gccgacgtaaacttcaaggtagccaaagaaattacagaccgcatccgtgaaaaggccatc
gacagaaaaatcctgatttctgttgaacccgggcagatgtttgtcaaaatcgtgcaggaa
gagctcactgaactgatgggcggcaatgccgaggggatcaatatcaaaggcgaccccgcg
gtgatcctgatcgccggtttgcaaggttccggtaaaaccacattctccggaaaactcgct
tcattactaaaaaaacaagggcgccaggtacttttgactgcctgcgacgtgtaccgccct
gcggcgatcgaccagctgaaagtgctcggagagcagatcggcgtggaggtatattctgag
cctgagaacaaaaatgcggtaagcattgcgcagaacgcggtgtcgcacgctaaaaaatcc
ggcaaaaagatcgtgatcgtcgatacggcgggccgtttggcagtggacgaggtgatgatg
aaagaggtggaagacattaaaacttccgtaaaaccttccgaaatcctcttcgtagtcgac
tcgatgaccggtcaggacgcggtgaacacggctaaaacctttaacgaaagacttgatttc
gacggtgtagtacttaccaaactcgacggtgacgcccgcggtggtgcggcgctttcgatc
cgccaggtggtcgaaaaaccgatcaaatacatcagtaccggggaaaaaatggaagcgctc
gactccttctaccccgatcgtatggcaagccggatcctcggcatgggtgacgtgatctcc
ctcgtggaacgcgcacagcaggcattcgacgaagacgaggcaaagcgcattaacgccaaa
atgcgtcagaataaattcgattttgacgacttcctcggccaattgcagcagatcaaaaag
atgggtaacgtaaaagacctcatcggaatgattccgggcatgggctcagccattaagaac
ctcgatatcgacaacgaatcgttcaaacccattgaagcgatcattcagtcgatgaccaaa
aaagaacgcgagaaccccgatatcatcgacggcagccgcaaaaaacgcattgcagccggt
agcggcaccaccattctgcaagtcaacaacctgatcaaacaatttgatgaaatgcggaaa
atgatgaaaaaaatgaataccatgcaggcggccggcaagcttggcaaagcaatgcgccgc
taa

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