Dyadobacter fermentans: Dfer_3425
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Entry
Dfer_3425 CDS
T00970
Name
(GenBank) uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00860
Porphyrin metabolism
dfe01100
Metabolic pathways
dfe01110
Biosynthesis of secondary metabolites
dfe01240
Biosynthesis of cofactors
Module
dfe_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Dfer_3425
Enzymes [BR:
dfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
Dfer_3425
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Gene cluster
GFIT
Motif
Pfam:
URO-D
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
ACT94635
UniProt:
C6VSZ0
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All DBs
Position
4186198..4187226
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AA seq
342 aa
AA seq
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MNLKNDLLLRAARGEKTERTPVWMMRQAGRILAEYRAVREKAGSFIKLATTPEMAAEVTL
QPVDLLGVDAAIIFSDILVIPEAMGLPYEMIEQRGPVFPSTVHSLADLQKLHIAEPETDL
KYVLDAIKITKEGLAGRVPLIGFAGAPFTIFCYMTEGKGSKTFSVAKKHLYAEPEFSHTL
LQQITDSTIAYLKAQIAAGADIVQLFDSWAGILSPEQYRVFSLPYIKQICDAITEVPVTV
FAKGAFFARKEIGELSCSVVGLDWNMDISESRALVPNKTLQGNLDPCVLYASYDQIRKEV
KNMVDQFGTQRYIANLGHGVYPDTDPDKVRCFIEAVKEYSSL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaaaatgaccttttgcttcgggcggcgcggggagagaagaccgaacgcacg
cctgtttggatgatgcgccaggccggtcgcatccttgctgaataccgggccgttcgcgag
aaggccggaagttttatcaaattggctaccacacctgaaatggcagcagaagtgaccctg
caacccgtagatttgctgggcgtggatgctgccattatattttccgacatcctggtgatc
cccgaagccatgggactgccttacgagatgatcgaacaacgcggacctgttttcccgagc
accgtacattcattggccgatctccaaaaactgcatatagccgagccggaaacggatctc
aaatatgtgctggatgccattaaaattacaaaagaaggcctcgcaggccgcgtgccgctc
atcggttttgctggcgcgccgttcacgattttctgttacatgacggaaggcaaaggctcc
aaaactttttcggtagcaaaaaagcatttgtacgccgaacctgaattttcgcatacatta
ttacaacaaatcaccgacagcacgatcgcttacctgaaagcgcagatcgccgccggtgcg
gatattgtccagcttttcgattcctgggcgggcattctctcgccggagcaatatcgcgtt
ttctcgctgccttatatcaaacagatctgcgacgcgattaccgaagtgccggtgactgtt
tttgccaaaggcgcattctttgccaggaaggaaatcggggagctgagctgctcggtggta
ggcctcgactggaatatggacatttccgaatcccgcgcgctggttcccaacaaaactttg
cagggcaacctcgatccgtgcgtgctttacgcttcttacgatcagatccggaaggaagtg
aagaatatggtcgatcagtttgggacgcagcgctacattgccaacctcggccacggcgta
taccccgacaccgatcccgacaaggtaaggtgcttcatcgaggcagtgaaagagtattct
tccctttaa
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