KEGG   Dyadobacter fermentans: Dfer_3478
Entry
Dfer_3478         CDS       T00970                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
dfe  Dyadobacter fermentans
Pathway
dfe03010  Ribosome
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Dfer_3478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dfe03011]
    Dfer_3478
Ribosome [BR:dfe03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Dfer_3478
  Bacteria
    Dfer_3478
SSDB
Motif
Pfam: S1 Spt6_S1 MazE_antitoxin
Other DBs
NCBI-ProteinID: ACT94688
UniProt: C6VT43
LinkDB
Position
complement(4257551..4259347)
AA seq 598 aa
MSKEKQNQPLPEFDWDKASDKGFGTAYSSADRTRLEQMYETTLSPVSEKEVVKGVVVGIT
DREVILNIGFKSDGIVSSNEFRDLPGLKIGDEVEVYVENQEDAQGQLVLSRKKAKVITAW
DNIQKSFDEDVVIDANVKRRTKGGLIVDIFGIEAFLPGSQIDVKPIRDFDVFVGKRMEVK
VVKINYANDNVVVSHKILIEKDLEAQRQQILNNLEKGQVLEGVIKNMTNFGVFIDLGGVD
GLLHITDISWGRINHPSDLLSLDQKLNVVVLDFDEEKKRISLGLKQLQSHPWDSLDESIQ
VGSKVTGRIVNVADYGAFLEIKPGVEGLIHVSEMSWSQHLRNPQEFMNVNDEISAVVLTL
DRQERKMSLGIKQLTEDPWTQGSLKEKYAIGTRHKGVVRNLTNFGLFIELEEGIDGLVHV
SDLSWTKKIKHPSDFVKVNDELEVVVLELDADNRRLALGHKQLEENPWDTFESIFEVGSV
HKSTIVAKGDKFATLELPYGIEGVASIKNLAKEDGTFAEVGESLDFTVLEFLKDEKKIVL
THSKVKGVPAEERKEAKAAKAPAAESVNKEVEKSTFGDLSVLSALKEQFEESEKKGKK
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtctaaggaaaaacaaaatcaaccgcttcccgaattcgattgggacaaagcatcagac
aaaggtttcggaaccgcttattcatctgccgaccgtacccgtctggaacaaatgtatgaa
actaccctttctccggtttcggaaaaagaagtggttaaaggtgttgtagtaggtattaca
gaccgcgaggtgatcctgaacatcggtttcaaatctgatggtatcgtttcatccaatgaa
ttccgcgacctgccaggtttgaaaatcggcgacgaagtggaagtttatgtagagaaccag
gaagacgcacaaggtcagctggtactttcacgcaaaaaagcgaaagttatcactgcatgg
gataatatccagaaatcattcgacgaggatgttgtgatcgatgcaaatgtgaagagaaga
accaaaggtggtttgatcgttgatattttcggcattgaagcattcttgccaggttcacag
atcgatgtgaagcctatccgcgatttcgacgttttcgttggaaagcgcatggaagtaaaa
gttgtgaaaatcaactacgcgaacgataacgtagtagtatctcacaaaatcctgatcgaa
aaagatcttgaagcacaacgtcagcagatcctgaacaaccttgaaaaaggtcaggtactg
gaaggcgtgatcaaaaacatgaccaacttcggtgtgttcatcgacttgggtggtgtggat
ggtctgttgcacattactgatatctcttggggccgtatcaaccacccatctgacctcctt
tcactggatcagaaactgaacgtggttgtgctcgacttcgacgaagagaaaaaacgcatt
tctttgggtctgaaacaacttcagtcacacccatgggattctctggacgagtcaatccag
gttggatcgaaagttacaggtcgcatcgtgaacgttgctgactacggcgctttcttggaa
atcaaaccaggtgttgaaggtctgatccacgtttctgaaatgtcatggtctcagcacctg
cgcaatccacaggagttcatgaacgtgaacgacgagatcagtgcggttgtattgacgctt
gaccgtcaggagcgcaaaatgtccctcggcattaagcagcttaccgaagatccttggact
caaggttcattgaaagagaaatatgcgatcggtacccgtcacaaaggtgttgttcgtaac
ctgaccaacttcggtctcttcatcgagcttgaagaaggtatcgacggtctggtacacgtt
tctgacctttcatggactaagaaaatcaagcatccttccgacttcgtgaaagtaaacgac
gagctggaagtagttgtactcgaactggacgcggacaaccgtcgtcttgctttgggccac
aagcagcttgaagaaaacccatgggatactttcgaaagcattttcgaagtaggttcagtt
cacaaatcgactatcgttgcgaaaggtgacaagtttgccacactcgaacttccttacgga
atcgaaggtgttgcttcgatcaaaaacctggcgaaagaagacggaacatttgctgaggta
ggtgaaagccttgacttcactgttcttgaattcctgaaagacgagaagaagatcgttctg
actcactctaaagttaaaggtgttcctgctgaggaaagaaaagaagcaaaagctgccaaa
gctcctgctgctgaatcagtgaacaaagaagttgagaaatcaactttcggagaccttagc
gttctgtctgctttgaaagagcagttcgaagagagcgagaagaaaggaaaaaagtaa

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