Dyadobacter fermentans: Dfer_3478
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Entry
Dfer_3478 CDS
T00970
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Dfer_3478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dfe03011
]
Dfer_3478
Ribosome [BR:
dfe03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Dfer_3478
Bacteria
Dfer_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ACT94688
UniProt:
C6VT43
LinkDB
All DBs
Position
complement(4257551..4259347)
Genome browser
AA seq
598 aa
AA seq
DB search
MSKEKQNQPLPEFDWDKASDKGFGTAYSSADRTRLEQMYETTLSPVSEKEVVKGVVVGIT
DREVILNIGFKSDGIVSSNEFRDLPGLKIGDEVEVYVENQEDAQGQLVLSRKKAKVITAW
DNIQKSFDEDVVIDANVKRRTKGGLIVDIFGIEAFLPGSQIDVKPIRDFDVFVGKRMEVK
VVKINYANDNVVVSHKILIEKDLEAQRQQILNNLEKGQVLEGVIKNMTNFGVFIDLGGVD
GLLHITDISWGRINHPSDLLSLDQKLNVVVLDFDEEKKRISLGLKQLQSHPWDSLDESIQ
VGSKVTGRIVNVADYGAFLEIKPGVEGLIHVSEMSWSQHLRNPQEFMNVNDEISAVVLTL
DRQERKMSLGIKQLTEDPWTQGSLKEKYAIGTRHKGVVRNLTNFGLFIELEEGIDGLVHV
SDLSWTKKIKHPSDFVKVNDELEVVVLELDADNRRLALGHKQLEENPWDTFESIFEVGSV
HKSTIVAKGDKFATLELPYGIEGVASIKNLAKEDGTFAEVGESLDFTVLEFLKDEKKIVL
THSKVKGVPAEERKEAKAAKAPAAESVNKEVEKSTFGDLSVLSALKEQFEESEKKGKK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggaaaaacaaaatcaaccgcttcccgaattcgattgggacaaagcatcagac
aaaggtttcggaaccgcttattcatctgccgaccgtacccgtctggaacaaatgtatgaa
actaccctttctccggtttcggaaaaagaagtggttaaaggtgttgtagtaggtattaca
gaccgcgaggtgatcctgaacatcggtttcaaatctgatggtatcgtttcatccaatgaa
ttccgcgacctgccaggtttgaaaatcggcgacgaagtggaagtttatgtagagaaccag
gaagacgcacaaggtcagctggtactttcacgcaaaaaagcgaaagttatcactgcatgg
gataatatccagaaatcattcgacgaggatgttgtgatcgatgcaaatgtgaagagaaga
accaaaggtggtttgatcgttgatattttcggcattgaagcattcttgccaggttcacag
atcgatgtgaagcctatccgcgatttcgacgttttcgttggaaagcgcatggaagtaaaa
gttgtgaaaatcaactacgcgaacgataacgtagtagtatctcacaaaatcctgatcgaa
aaagatcttgaagcacaacgtcagcagatcctgaacaaccttgaaaaaggtcaggtactg
gaaggcgtgatcaaaaacatgaccaacttcggtgtgttcatcgacttgggtggtgtggat
ggtctgttgcacattactgatatctcttggggccgtatcaaccacccatctgacctcctt
tcactggatcagaaactgaacgtggttgtgctcgacttcgacgaagagaaaaaacgcatt
tctttgggtctgaaacaacttcagtcacacccatgggattctctggacgagtcaatccag
gttggatcgaaagttacaggtcgcatcgtgaacgttgctgactacggcgctttcttggaa
atcaaaccaggtgttgaaggtctgatccacgtttctgaaatgtcatggtctcagcacctg
cgcaatccacaggagttcatgaacgtgaacgacgagatcagtgcggttgtattgacgctt
gaccgtcaggagcgcaaaatgtccctcggcattaagcagcttaccgaagatccttggact
caaggttcattgaaagagaaatatgcgatcggtacccgtcacaaaggtgttgttcgtaac
ctgaccaacttcggtctcttcatcgagcttgaagaaggtatcgacggtctggtacacgtt
tctgacctttcatggactaagaaaatcaagcatccttccgacttcgtgaaagtaaacgac
gagctggaagtagttgtactcgaactggacgcggacaaccgtcgtcttgctttgggccac
aagcagcttgaagaaaacccatgggatactttcgaaagcattttcgaagtaggttcagtt
cacaaatcgactatcgttgcgaaaggtgacaagtttgccacactcgaacttccttacgga
atcgaaggtgttgcttcgatcaaaaacctggcgaaagaagacggaacatttgctgaggta
ggtgaaagccttgacttcactgttcttgaattcctgaaagacgagaagaagatcgttctg
actcactctaaagttaaaggtgttcctgctgaggaaagaaaagaagcaaaagctgccaaa
gctcctgctgctgaatcagtgaacaaagaagttgagaaatcaactttcggagaccttagc
gttctgtctgctttgaaagagcagttcgaagagagcgagaagaaaggaaaaaagtaa
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