Dyadobacter fermentans: Dfer_3506
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Entry
Dfer_3506 CDS
T00970
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_3506
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dfer_3506
Archaeal homologous recombinant proteins
Dfer_3506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF2552
UBA_7
Motif
Other DBs
NCBI-ProteinID:
ACT94715
UniProt:
C6VTU7
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All DBs
Position
4282573..4283793
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AA seq
406 aa
AA seq
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MKILHTADWHIGKKLDNFSRLEEQRLVLDEICEIAEHEAVDAIVIAGDLFDNFNPSSEAT
ELLYSTLHRLSANGTRAVIAIAGNHDSPERIQVPDALAKVCGILFVGFPNTEIRPFCTQG
QVDIIKTAPGFLEIKLPNAAFPLRVLHTPYANEQRLKTFLGVEESEEALRIHLQQHWQQL
ADEHLDNNGFNLLATHLFVMQKGGEMPEEPDDERPILHIGGAQAIYTENFPKQVHYIALG
HLHRFHQVDKVPAPAVYSSSPLAYSFSEANQNKYVILIEAEAGKLVGYTPIELLKGKKLR
RKSFHSIDEAIEWLGEHSEDLIELTIISDNYLEASDKKRLMEAHSGIIQIIPQIKKSEVA
DTSSEVDLSLSMEKLFQEYFKSKNKGQEPSNGLMEVFREVLGSEAE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgcacaccgccgactggcatatcggcaaaaagctcgataacttttcccgc
ctcgaagaacaacggcttgtcctggacgaaatctgcgaaatagcagaacacgaggccgtc
gacgcgatcgtgatcgcgggcgacttgttcgacaactttaacccgtcgtccgaagcgacc
gagcttttgtacagcacattgcaccggttatctgccaacggcacccgggccgtgatcgcc
atcgccggcaaccacgattcccccgaacgcatccaggtccccgacgcactggcgaaggtt
tgcggcattctgttcgtcggttttcccaatacggaaatcaggccattctgcacgcagggg
caggtcgatattatcaaaaccgcgcccggcttcctggaaatcaaactacccaatgccgca
tttcccctgcgcgtattgcacacgccttacgcgaacgagcagcgcctcaaaacgttcctc
ggcgtggaagaatccgaagaagcattgcgcattcacttgcagcagcattggcagcagctc
gccgacgagcatttggacaataatggcttcaacctgctagccacgcatttgttcgtcatg
caaaaaggcggcgaaatgcccgaagagcccgacgacgagcgtccgatcctgcatatcggc
ggcgcccaggccatttacaccgagaacttcccgaagcaagtgcattacatcgcattaggc
catttgcaccgcttccaccaggtagataaggtgcccgccccggccgtatattccagcagt
ccgctggcttacagcttttcggaagcgaatcagaacaagtatgtaatattaatcgaagcc
gaagccggaaaactggtcggttacacgcctatcgagcttttgaaaggcaaaaagctgcgc
cgcaaaagctttcacagcattgatgaagccattgaatggctaggcgagcattcggaagat
ttgatagaactgaccattatctcggataattatctcgaagcatccgataaaaagcggctg
atggaagcgcattccggcattatccagattattccgcagattaagaaaagtgaagtagcc
gatacgtcgtcggaagtggatttgtctttgagtatggagaagttgtttcaggagtatttt
aaatctaaaaacaaaggccaagaaccttcgaacggcctaatggaagtcttccgagaagtg
ctaggcagcgaagcagaatga
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