Dyadobacter fermentans: Dfer_3558
Help
Entry
Dfer_3558 CDS
T00970
Name
(GenBank) Polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00900
Terpenoid backbone biosynthesis
dfe01100
Metabolic pathways
dfe01110
Biosynthesis of secondary metabolites
Module
dfe_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Dfer_3558
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dfe01006
]
Dfer_3558
Enzymes [BR:
dfe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Dfer_3558
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Dfer_3558
2.5.1.29 geranylgeranyl diphosphate synthase
Dfer_3558
Prenyltransferases [BR:
dfe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Dfer_3558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
YodE
Motif
Other DBs
NCBI-ProteinID:
ACT94766
UniProt:
C6VTZ8
LinkDB
All DBs
Position
complement(4352535..4353509)
Genome browser
AA seq
324 aa
AA seq
DB search
MIQPASLLEKLQTEFDRHSYGDAPVELYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDK
AIKPAMAVEVFHNFTLMHDDIMDRAPLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLD
IPKEQLRSVLARFNRTAAEVCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFALELG
GIIAGADDETVQLLYSAGENMGIGFQLKDDLLDVYGDPAKFGKQVGGDIIANKKTFLLIE
ALSKANGDLKTELDRWISLDTFDNAEKVAAVTGIYDALGIRAFTEHKINEYFSRGIASLQ
QLRSDSVQKDVLLQFVDQLVAREK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatccaacccgcatcattacttgaaaaactgcaaactgaattcgaccggcattcttac
ggcgacgccccggtggagctttacgagccgatcagctacattatgtcgctcggcggaaag
cgtttccggccgctgctgactttgcttgccgcatctatttttgatacagatattgataaa
gccataaaaccggcgatggccgtggaggtgtttcacaacttcacgctcatgcatgacgac
atcatggaccgcgctccgctgcgccggggcatgcctaccgtacatgagaagtgggatgcg
aacacggccattctttccggcgatgtgatgctgatccgcgcttatgacctgctgctggac
ataccgaaggagcaattacggtctgttttagcacgcttcaaccggaccgctgccgaggta
tgtgaaggccagcagctcgatatgaacttcgaaaagcgctgggacgtgaccgaagcggaa
tatattggtatgatccgtttgaaaacctctgtcctgctcggattcgcgctggaactgggc
gggatcatcgccggggcggacgacgaaacggtccagctgctttattctgcgggcgaaaac
atgggcattgggttccagctcaaagacgacctgctggacgtgtacggcgatcctgccaag
tttggaaagcaggtgggcggcgatattattgccaataagaagacgttcctgctcattgaa
gcgctatcgaaggccaatggcgacctgaaaaccgagttggaccgctggataagtctggat
acgttcgataatgcggaaaaggtagcagccgtgaccggcatttacgacgcgctcggtatc
agggcatttaccgaacataaaataaatgaatatttttcgcggggaatagctagcttacag
caactgcgttcagatagtgttcagaaggacgtgcttttgcagtttgtggatcagcttgtg
gcgcgggaaaagtaa
DBGET
integrated database retrieval system