Dyadobacter fermentans: Dfer_3900
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Entry
Dfer_3900 CDS
T00970
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03030
DNA replication
dfe03430
Mismatch repair
dfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dfer_3900
03430 Mismatch repair
Dfer_3900
03440 Homologous recombination
Dfer_3900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfe03032
]
Dfer_3900
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_3900
Enzymes [BR:
dfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dfer_3900
DNA replication proteins [BR:
dfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dfer_3900
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dfer_3900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
EF-G_D2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACT95104
UniProt:
C6VXS1
LinkDB
All DBs
Position
complement(4744742..4745551)
Genome browser
AA seq
269 aa
AA seq
DB search
MHTLHLKKPIAFFDLETTGVNIVRDRIVEISVVKALVNGETEIRTRRINPEMPIPLESSL
IHGIYDEDVKDAPTFKSVAKNLASFLEGCDLAGFNSNRFDIPMLVEEFLRVGVDFDVKNR
RMVDVQRIYHMMEPRNLSAAYKFYCGKTLNNAHSAEADTIATFEVLQGQIEKYQGVTITD
SHGKVTEPVKNDIAVLHELTASRIVDFAGRMVYNDKGEEVFNFGKHNGKRVTDILKNEPS
FFDWMMKGEFPLDTKRKLTEIKLRGLTQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcataccctccatctcaaaaagcccattgctttttttgatcttgagacaacaggagtc
aatatcgtccgcgaccgcattgtagagatttccgttgtaaaggcattggtaaatggcgaa
accgagatccgcacgcggagaatcaatcccgaaatgcctatcccgttggaaagcagcctg
atacacggcatttacgacgaggatgtaaaggacgcccccacttttaaaagcgttgccaaa
aacctggcgtcgttcctcgaaggatgcgacctggcaggtttcaacagcaaccgtttcgac
attccaatgctcgtggaggaattcctgcgcgtaggtgtggattttgacgtgaaaaaccgc
cggatggtggacgtccagcgcatttaccacatgatggagccgcgtaacctttcggccgcc
tacaagttctattgcggcaaaaccctcaacaatgcacacagcgccgaggccgatacgatc
gctacattcgaggtgctgcaaggccagatcgaaaagtatcagggcgttaccattaccgac
tcgcatggcaaggtgaccgagcccgtgaagaacgacattgctgtcctgcatgagcttacc
gcgtccagaatcgtcgatttcgcaggccggatggtgtataacgacaagggtgaagaggtg
ttcaattttggcaaacacaatggaaagcgcgtgaccgacatcctgaaaaacgagccttca
ttcttcgactggatgatgaaaggcgagttcccgctcgacaccaaacgtaaattgacggag
attaaattaaggggattaacccaacgttga
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