Dyadobacter fermentans: Dfer_4095
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Entry
Dfer_4095 CDS
T00970
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dfer_4095
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dfe01007
]
Dfer_4095
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfe03016
]
Dfer_4095
Enzymes [BR:
dfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Dfer_4095
Amino acid related enzymes [BR:
dfe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Dfer_4095
Transfer RNA biogenesis [BR:
dfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Dfer_4095
Prokaryotic type
Dfer_4095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ACT95298
UniProt:
C6VZX1
LinkDB
All DBs
Position
4945238..4947880
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AA seq
880 aa
AA seq
DB search
MISKTYAPQEIEDKWYSYWIENKFFQSKPNPDKEPYTIVIPPPNVTGVLHMGHMLNNTIQ
DILIRKARMEGKEACWVPGTDHASIATEAKVVAMLKERGINKRDLTRDEFLEYCWEWTHK
YGGIILKQLRKLGASCDWDRTRFTMEPDLYDSVIDVFIDLYNKGEIYRGHRMVNWDPQAR
TTVSDEEVIMKEVNQKLVYLRYPLVGEDGEGRMEEGVTIATTRPETIMADVAICVNPADE
RYQHLIGKKVLIPLINRAIPIIADDYVEMEFGTGCLKVTPAHDTNDYELGKRHNLPIIDL
LNEDGTLNDKAQILVGEERFVARKKIIKLLEESGNLVKVEEYRSNVGHSERTDSVIEPRL
SEQWFLRMEKISKPAFDNVMNDTVQLIPAKFKNTYRHWMENVRDWNISRQLWWGHRIPAY
YLNDGTMIVAKSKREALRKAQHEYQLFALTEEDITQDPDVLDTWFSSWLWPISVFNGIKE
PDNEEVNYYYPTNDLVTAPEILFFWVARMIIAGYEYRGQYPFKNVYLTGIVRDKQGRKMS
KSLGNSPDPIDLIEKYGADSIRTGMLFSSQAGNDLPYDEKLIEQGRNFGNKIWNAFRLVK
GWTVDSELPVPEGSKLAVQWFESKLNQTLAEVQDHFSKFRISDALNSVYKLIWDDFCAQY
LEMIKPGFEQPIDLSTYDSTLDFFDRQMRLLHPFMPFISEEIWQNIIERGEKESICIAHF
PQAAEFDQSLLNDFDILFELVSSIRNLRNSKGISPKTALPLAIRTDSNERYNALTPLIEK
LANVEGISYVSGEAEGTSFRVKSDEFFVNLADELDVEAERENLLRELEYTKGFLDSVMKK
LSNERFVANAKGDIVEKERAKQADAEAKIATLTEALARLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaaaacttatgcccctcaggagatagaggataaatggtactcctactggatc
gagaacaagttctttcagtcgaaacccaatccggataaagaaccttacaccatcgtgatc
ccgccgccgaacgtcaccggcgtgctgcacatggggcatatgctcaataataccattcag
gacatcctgatccgtaaggctcggatggaaggcaaagaagcctgctgggtgcccggcacc
gaccacgcttccattgccaccgaagccaaagtggtggcgatgctcaaagagcgcggcatt
aataagcgcgacctcacgcgcgacgaattcctcgaatattgctgggaatggacgcacaaa
tacggcggcattatcctgaaacaacttcgtaagctcggcgcatcctgcgactgggaccgc
acgcgcttcacaatggagccggatttgtacgattcggtgatcgacgtttttatcgacctc
tataataaaggagaaatctaccgcggccaccgcatggtaaactgggacccgcaggcgcgc
acgacggtgtcggacgaggaggtgatcatgaaggaggtgaaccagaagctggtgtatctt
cggtatccgcttgttggagaggatggagaagggagaatggaggaaggggtgactattgca
actacccggccggagacgattatggccgacgtagcgatttgtgtaaaccctgcagacgag
cgttaccagcatttgattggtaaaaaagtgctcattccattgatcaatcgggcgattccg
attatcgcggatgattatgtggaaatggaattcggaacgggctgtctgaaagtgacgccg
gcgcatgataccaatgactacgagcttggcaaacgccataacctgcccattatcgacctg
ctcaatgaggatggtacgttaaacgacaaggcgcagattctcgtgggcgaagaacgtttc
gtggcccggaagaagatcatcaagctcctcgaagaatcgggtaacctcgtgaaagtggag
gaataccggtcgaatgtagggcattcggagcggacggactccgtgatcgagccgcggctt
tcggagcagtggtttttgagaatggaaaaaatcagcaagccggcattcgacaatgtgatg
aacgataccgtgcaactgatccctgcgaaatttaaaaatacctaccgccactggatggag
aatgtgcgcgactggaatatcagccgccagctgtggtggggccaccgcattccggcttac
tatctcaacgacggcacgatgatcgtcgcgaagtccaagcgcgaggcgttgcggaaagcg
cagcacgaataccagctttttgcattgaccgaagaggacattacccaggaccccgacgtg
ctggatacctggttttcatcctggctctggccgatttcggtttttaatggcattaaagag
cctgataatgaggaggttaactattattacccgaccaatgacctcgttactgctccggaa
attctcttcttctgggtggcgcggatgatcatcgcgggttatgaataccgcggccagtac
ccgtttaagaacgtgtacctgacgggtattgtgcgcgataagcaaggccgcaaaatgtcg
aaatcgctgggtaactcgcccgatccgatcgacctgatcgaaaaatatggtgcggatagc
attcgtaccgggatgcttttcagctcgcaggcgggtaacgacttgccttacgacgagaag
ctgatcgagcagggacggaattttggtaataaaatctggaatgcattccgtttggtaaaa
ggctggaccgtagacagtgagctgccggttccggaaggttcgaaactggcggtccaatgg
tttgaaagtaaactgaaccagacattagcagaagtacaggaccacttctcgaaattccgc
atttcggatgcattgaattcggtgtacaagctgatctgggacgatttctgcgcgcagtat
cttgaaatgatcaaacccggcttcgaacaaccgatcgatctctcgacttacgactcgacg
ctcgatttcttcgatcgccagatgcgtttgctgcatccattcatgccgtttatttccgag
gaaatctggcagaatattattgaaaggggcgaaaaggagtccatttgcatagcgcatttc
ccgcaagccgcggaatttgatcagtcgctgctgaatgattttgatatactttttgaactg
gtttcgtctatccgtaacctgcgtaattcgaaaggcatcagtccgaaaacggcattgccg
ctcgcaattcgtaccgattcgaacgagcgctacaatgcattgacgccgctgatcgaaaag
ctggcgaatgtagaaggcattagttatgtatcgggtgaagcggaaggaacctccttccgc
gtgaagtcggacgagtttttcgtgaacctggccgatgagctggatgtggaagcggaacgc
gaaaacctcctccgcgaattggaatacacgaaaggcttcctggattcggtgatgaaaaaa
ctctcgaatgagcgttttgtagccaatgcaaaaggcgatatcgtcgaaaaggaaagggcc
aagcaggccgacgccgaagcgaagatcgcgacgttgaccgaggcattagcaagattaaaa
taa
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