Dyadobacter fermentans: Dfer_4183
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Entry
Dfer_4183 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_4183
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_4183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACT95386
UniProt:
C6W059
LinkDB
All DBs
Position
complement(5051561..5053393)
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AA seq
610 aa
AA seq
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MISGYKNLKTIAATACAVTTIFLLGCDKARLEPRPLSFFSPDKTFDDPDGLKATLIACER
NMRYEWFGDNPPIITEAIFSDIAVEGTTDKSGPAQNMNLQITPDAQLNSTDYNRIGWYWL
EGYKGIKYANVAISRINQPTYGSEAEKNALLGAAYFHRAYRYYRLVHQFGDVPLILDEVV
EPKLDFYSTKREVILQKMKTDLEFAEQWVPAMTDKGTVNKGAVSHLLTKINLALGLFDDA
IKSAGNVIDGGTHRLMTSRFGAHLGDPTKNLIWDLHRPENKSIANNTEALLLVIDRFMMD
GNFDGGIQSMRNAVPFWHNNINTPNGSRGTIDTYNIEIDQVTRFGRGIGRLRPTYYSTDG
VWDDKNDLRHAPGNWMRMEDLVYNNPALKGKDSFFGKNLQLRTTDGSLLTIDTIRCWFDW
PHYKLYVPDPERVQPAGGHTDWYVFRLAETHLLRAEAYFWKGDLANAAKDLNAVRERAGA
APIAAGKINIGTILDERARELYYEEPRKTELTRIAYILAQTGKTAYNGKTYSLNNFSDDN
FFYDRVIEKSNFYNKGVKTRHGDEYLISPYHVLWPIPSPTIQGNTKGIINQNKGYAGYER
NVPPLTSIPQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatttccggatataaaaatctcaaaacaattgccgccaccgcctgcgccgtgacgacc
attttcctgctcggctgcgacaaagcgcggttggagccccggccgctttcctttttctcg
ccggacaaaaccttcgacgatcccgacggactgaaagcgacgctcatcgcctgtgagcga
aatatgcgctacgagtggtttggcgacaatccgccgatcattaccgaggcgatcttctca
gacattgccgtggaaggcaccaccgacaaatcgggcccggcgcagaacatgaacctgcaa
atcacccccgatgcccaactcaacagcactgattacaaccggatcggatggtactggctg
gaaggttacaagggtattaaatatgccaatgtggccatttcgcggatcaaccaacctact
tatggaagtgaggccgaaaaaaatgcattactcggagcagcctactttcaccgcgcctac
cgttactaccgccttgtgcaccagtttggcgatgtgccgctgatcctggatgaagtagtg
gaaccaaagctggatttttactcgacgaaaagagaggtgattttgcaaaaaatgaaaaca
gacctcgaattcgccgagcaatgggtgcctgctatgacggataaaggcactgtgaacaaa
ggcgccgtgagccacctgctcacgaagatcaacctcgcattgggactttttgacgatgcg
atcaaatcggcgggtaatgtgatcgatggcggaacgcaccggctgatgacgagccgtttc
ggggcacacctgggcgacccgaccaaaaacctcatttgggacctccaccggccggaaaac
aagtccattgccaacaataccgaagcattgctgctcgtaatcgaccgcttcatgatggat
ggaaatttcgatggcggtatccaatccatgcggaatgccgtgccgttctggcacaacaac
atcaatacgcccaacggaagccgcggcacgatcgatacctataatattgaaatagaccag
gtgaccaggtttgggcggggcattggccgcctgcggcctacctactattcaaccgacggc
gtttgggatgataaaaatgatttgcgccatgcgccgggcaactggatgcgaatggaagat
ttggtatataacaatccggcgttgaaaggaaaggatagcttctttgggaaaaacctccaa
ctccgcaccaccgacggctcattgctcaccatcgacaccatccgctgctggttcgactgg
ccgcattataaactatatgtccccgaccctgagcgcgtgcagccggcaggtggccacacc
gactggtacgttttccgactggccgaaacgcatttgttgcgcgccgaagcctacttctgg
aaaggcgacctcgccaatgcagccaaggacctgaacgccgtgcgtgaaagagccggcgcc
gctcccattgccgccggtaaaatcaatatcgggacgatcctcgacgaaagagcacgcgag
ctctactacgaagaaccgcgcaaaaccgagctgacccgcattgcttacattctggcgcaa
accggcaaaactgcatacaacggcaaaacatacagcctgaacaatttctccgacgacaac
ttcttttacgaccgcgtgatcgaaaaaagtaacttctataataaaggtgtcaaaacaagg
catggcgacgaatacctgatcagcccgtatcacgtgctctggcccatcccgtcacccacg
atccagggaaataccaagggcattatcaatcagaataagggctatgccggctacgagcgc
aatgtaccgccgctcacgagcattccgcaatga
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