Dyadobacter fermentans: Dfer_4370
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Entry
Dfer_4370 CDS
T00970
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dfer_4370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfe03021
]
Dfer_4370
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_4370
Enzymes [BR:
dfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dfer_4370
Transcription machinery [BR:
dfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dfer_4370
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dfer_4370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACT95572
UniProt:
C6W1Z7
LinkDB
All DBs
Position
5283266..5284234
Genome browser
AA seq
322 aa
AA seq
DB search
MPDKVVMEKADDFHGLFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFPGVLHEFS
SIEGIVEDVTEIILNLKMVRFKKVSDLSESRIVVNLKNVSVITAGDIGKFTSAFEVLNPD
QVICHIDDQKEFEMELLLDKGRGYVPADEPRANELPFGYIAVDSIYTPIKNVKYSVENTR
VEQRTDYERLLIDIQTDGSIHPEDALKGAANILIQHFMLFSDQTMTFEKQKAEEDNQVDE
EMLRMRKLLKTSLSELDLSVRAYNCLKSADVKTLGDLVRLEISDMMKFRNFGKKSLTELE
QLVADKQLTFGMDVSKYRLDED
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataaggtcgtcatggagaaagcagacgactttcacgggttgtttgagtttaag
cctttagagaaaggatacggcgtaaccattggtaatgcgttgcgtaggattctcctttca
tctttggaaggctatgccatcacgagtgtgaagttcccaggcgtgcttcacgaattttct
tctatcgaaggtatagttgaggatgttacggaaatcatcctgaaccttaaaatggttcgt
tttaaaaaagtttctgacctgagtgagagtaggatcgtagtaaacctgaaaaatgtttcc
gtcatcactgccggtgacattggcaagtttacaagcgcatttgaggttttgaacccagat
caggtcatttgccatatagatgatcagaaggagttcgaaatggaacttctcctggataaa
ggcagaggctacgtgcctgcagacgaaccacgggctaatgagcttccgttcggctacatc
gcggtagactcgatttatacgcctatcaaaaatgtgaaatacagcgttgaaaacacgcgt
gtggaacagcgtaccgactacgaacgtcttttgatcgacatccaaaccgatggttcaatc
cacccggaagatgcattgaaaggcgctgccaatattctgatccaacacttcatgctgttc
tccgaccaaactatgacgtttgagaagcagaaggcggaggaagacaatcaggttgatgag
gaaatgctgcgtatgagaaaactgttgaagacttcattgtctgaactggatctttcagta
cgcgcttacaactgtttgaaatctgcggatgtgaaaactttgggtgacctggtaagactg
gaaatttctgatatgatgaaattccggaacttcggtaaaaagtcactcaccgagttggaa
caactcgtagccgacaagcagctcacatttggaatggacgtgtcgaagtaccgtctggac
gaggattaa
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