Dyadobacter fermentans: Dfer_4381
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Entry
Dfer_4381 CDS
T00970
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00920
Sulfur metabolism
dfe01100
Metabolic pathways
dfe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Dfer_4381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_4381
Enzymes [BR:
dfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Dfer_4381
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Dfer_4381
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Dfer_4381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RepB_primase_C
Motif
Other DBs
NCBI-ProteinID:
ACT95583
UniProt:
C6W208
LinkDB
All DBs
Position
complement(5294113..5295147)
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AA seq
344 aa
AA seq
DB search
MNQIIEELRSFLSQPQKIVITTHRDPDADALGSSLGWASYLLKKGHEVTVISPTDYAANL
RWLSGMEHVLVYEKPSEQGKCKKKIEQATLICCLDFSALSRLKDLGKVVQDAAAPKMMID
HHLEPEHFAKWMVWDTTAAATAQLVYELVKEMEGGQPAEQIFDIPMAECLYAGIMTDTGS
FRHGNVTPAVHLAVADLMRTGFDSSRVHRLIYDNAPLSRLQFLGYVLCNKLTVLPEYRTA
YMVLTEAELQKFNSASGETEGIVNYGLQVENVVMSAMFIERKGEVKISFRSVGAFSVRDL
ASTHFSGGGHKNASGGRSEQPVNETVARFLSILPSYQEELLSVD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaaatcattgaagagctccgctcttttttatcccaaccccagaaaattgttatc
acaacgcaccgcgacccggatgcggatgcattgggatcgtccctgggctgggccagttat
ttgctcaaaaaaggccatgaagtgacggttatcagccctaccgactatgccgcgaacctt
cgctggctgtcgggcatggagcatgtactcgtgtatgaaaagccctcggaacaaggaaaa
tgcaagaaaaagatcgaacaggcgaccctgatctgctgccttgatttctcggcgctgtca
cgcctgaaagaccttggaaaggttgtccaggatgctgcggctcccaaaatgatgatcgac
caccacctcgaacccgagcattttgcgaaatggatggtttgggataccaccgcggccgcg
acggcgcagctggtttacgagctggtgaaggaaatggaaggtggccagcccgctgagcag
atcttcgatattccgatggccgaatgcctctacgccggcattatgaccgacacgggctct
ttccgtcacggcaacgtaacgcccgccgtacacctcgcagtggccgacctgatgcgtacc
ggtttcgattcgagccgggtccaccggctgatttacgacaatgcgccactttcgcggctg
caattcctgggttacgtgctttgcaacaagctgacggtgctgcccgagtaccgcacggcg
tacatggtgctgacggaggctgaactgcaaaaattcaactcggcgtcgggcgaaacggag
gggattgtgaactatggcctgcaagtggaaaatgtggtaatgtcggcaatgttcatcgaa
cgcaagggcgaggttaagatctcgttccggtcggtaggcgcattctcggtgagggacctt
gccagcacgcatttcagcggcggcggccataagaacgcttccggaggacgctcagaacaa
ccagtgaatgaaacagttgcgcggtttttaagcatacttccatcataccaggaagaactt
ttgagcgttgactaa
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