Dyadobacter fermentans: Dfer_4696
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Entry
Dfer_4696 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_4696
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_4696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_6
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACT95897
UniProt:
C6W4S3
LinkDB
All DBs
Position
5664490..5666409
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AA seq
639 aa
AA seq
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MKKIFQILSIAVLTLGWSCNDDDFLNRPPTGQLSEDQIWTDEGQVLSVLGDLYNRYVDIA
TFKTIRIDNNDVPGWTTVGDFNEAFWSEAGRYNVFQNSGWDLKSWSHWDYAYIREMNLFI
QKCTAADKLSPAVRERYLAEARFLRASYYFELVKRMGGVPLILEPMVYDYSGDPSYLQHP
RAKESEIYDFVIKEAEEIKDKLPATPGEKSRATKAAALAMEVRAALYAGSIAKYGVNTPA
VSLPGGEVGIPANMANGYYTKALAAAKEIITGKAGVYALYTKKPDLSENFASIFYDKANN
SEVIFVEDFKLQSGKVHYFTGWNQPRYGAEEEEGGRINPSLQFVEAFEKLDNTFAPIPTT
NANGTPIYYTDQTDIFAGRDARLAGTVILPGTTFKSRKVDIWAGYQLANGTVISGDDRGA
QKTLPGKTVPEQVVGFDGPIDGFEFTAQTGFYLRKYLDPVLGSGQRGVNSEVWLVRYRYA
EVLLNAAEAAFELGQAAEAAGYMNQVRERAGLVKPLKGSDINFDRIVHERRVELAFEGHV
LYDMKRWRIAHQIMDGNAITAAEVSKDLGKATKRNTQPWGLWSYKIYDPGSANNGKWIFK
PVKLSRVTGSDRFQLGNYYSYIDDAIISNNPKLVRNPNQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatatttcaaatactatcaattgccgtattgacattgggttggagctgtaac
gacgacgatttcctgaaccgtccgccaaccggccagctttcggaagaccagatctggacc
gacgaaggccaggtgttatccgtgctgggcgacctttacaaccgttatgtcgacattgcc
acattcaaaacaatccggatcgacaacaacgacgtgccgggctggacgacggtgggtgat
ttcaatgaggcattctggtcggaagcagggcggtataatgtattccaaaacagcgggtgg
gacctgaaatcgtggtcgcattgggactatgcctacatccgcgaaatgaacctgtttatc
cagaaatgtactgccgctgacaagctcagcccggccgtccgcgagcgctacctggccgaa
gcacgtttcctgcgggcatcctactactttgaattggtgaaaagaatgggcggcgtgccg
ctgatcctcgaaccgatggtgtacgattacagcggcgatccgagctacctgcaacatccg
cgtgcgaaagaatcggagatctatgattttgtaatcaaagaagcagaggaaatcaaagac
aagctgcctgcgacacccggcgaaaaatcgcgtgcgaccaaagccgctgcgctggcaatg
gaagtgcgggcggcgttgtacgccggctcgatcgcgaagtatggcgtaaacacgcccgcg
gtttcattgccgggcggcgaagtgggtatccctgccaatatggccaatggctattatacc
aaagcattggcggctgcgaaggagatcattaccggcaaggcaggtgtgtatgcattgtat
accaaaaagccggacttgtctgaaaacttcgcgagcattttctatgacaaagccaacaac
tcggaagtcattttcgtagaggatttcaaactgcaaagcgggaaggtgcattacttcacc
ggctggaaccagccgcgctatggtgccgaggaagaggaaggcggccgcattaacccgtcg
ctgcaattcgtggaagcatttgaaaaactggataacaccttcgcgccgatccccacaacg
aatgcgaacggcacgccgatttactacaccgaccagaccgacattttcgcaggccgcgac
gcccgcctcgccggaacggtaatcttgccaggtacgactttcaaaagtcgtaaggtggac
atttgggcaggttatcagctcgccaacggcacggtaatcagcggcgacgaccgcggtgca
caaaaaacgcttcccgggaaaaccgtacccgagcaggtagtaggtttcgacggcccgatc
gacggcttcgaattcactgcacaaaccggcttttacctccgcaaatacctcgatccggtg
ctcggctccggccagcgcggggtgaacagcgaagtgtggctcgttcgctaccgttacgcg
gaagtgcttctgaatgcagcggaagcggcatttgagctcggccaggcggcagaagcggcg
ggttatatgaatcaggtccgcgaacgtgccgggttggtaaagccgctgaaaggttcggac
atcaactttgatcgcatcgtgcacgagcgccgcgtggagctcgcattcgaagggcatgtt
ttgtatgatatgaaaagatggcgcattgcgcaccagatcatggacggcaatgcgatcacc
gccgccgaggtttccaaggatttgggcaaagccaccaagcgcaacacgcagccctgggga
ttatggtcatacaaaatctacgatccgggctcggccaacaatggcaagtggattttcaaa
ccggttaaactcagccgcgtcaccggctccgaccgcttccagcttggaaactactattcg
tacatcgacgacgccattatcagcaataatcccaagctcgtcagaaacccgaaccaatag
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