Dyadobacter fermentans: Dfer_5054
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Entry
Dfer_5054 CDS
T00970
Name
(GenBank) PKD domain containing protein
KO
K08738
cytochrome c
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00190
Oxidative phosphorylation
dfe01100
Metabolic pathways
dfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Dfer_5054
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dfer_5054
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThuA
GSDH
PKD_4
PKD
Cytochrom_C
CBM_6
K319L-like_PKD
Big_9
Cytochrome_CBB3
Y_Y_Y
Big_13
InlK_D3
DUF4159
Sde0182_C
Motif
Other DBs
NCBI-ProteinID:
ACT96254
UniProt:
C6W7R0
LinkDB
All DBs
Position
complement(6106349..6109756)
Genome browser
AA seq
1135 aa
AA seq
DB search
MSESPFQKVLKHFRIAGVAALACCSLAATAQTVTPEKRVLVFSKTAGFRHSSIPAGKTAI
LKLGKETGFSVDTTENSAVFTNKNLQKYAAVVFLNTTGNVLNDKQQDAFERYIQAGGGYV
GIHAATDTEYEWPWYNKLAGAQFLSHPGNPNVQEGEAFVVNDQHPSMDGFPKKWKIKDEF
YDFKNFNEKVNVLVKIDEKTYRDGKMGDNHPMSWYHEFDGGRAFYTNFGHEDATFINPVF
VKHLTGGLNWAMASKLDYAKSRPEENRFTKKVLVTKLDEPTELVVLDDQRVLLTERKGKV
KLYNPKTGKVKLVAEVPVYTKQEYGLMGLNIDPNFKTNKLVYMYYSPPSTAADTAQHLSR
FKYDDVKDTLLLSTEELMLTVPVKRTDCCHTGGSIAWDAKGNLYLSTGDDVNPFQSNGYG
PIDERPGREGWDGQHTSSNTNSLRGKVLRIKPRYGDRRANMPGGTNLYDIPEGNLFPPGT
EKTRPEIYVMGTRNPYRISVDQHTGYLYWGDVGPDASNDDPKRGPRGYDEVNQARKAGYF
GYPLFIGNNRPYIDFNFADSTSGKPFDPLKPINNSPHNTGLQELPPAQPAFIYYPYADSP
EFGPIVGKGGRNAMAGPVYYSADFQDSKVKFPSYYNGKFFAYDWIRDYINIVTMNEQGDL
QSIERFMPGTKFSHPIDMQFAKDGSLYTLEYGPNWFAQNDEASLSHITFNAGNRVPVAIA
SATNTTGATPLKVNFSSKGSMDHDGDPIKYEWSFGKGLPKSTVANPSYTYAKPGEYTATL
KVTDNAGNSNTSEVIVRVGNAIPKVDVAIKGNKTFYWNDMPVNYEVSVSDKEDGSLANKK
IPEDEVTLTINYLEGFDKTQLAQGHQANTGFETGKRMIELSDCKACHSVDKKSIGPAYRE
VAKKYASERNSLKTLTDKILKGGSGVWGEQAMPGHPQHKPEEIEEMVKYILDLNNTKAVD
KKPLKSSYVTQAKKKDGSYIFTASYTDRGNGTMGPLTGSKTVALRPSTLMANMADTTRNT
FKYKGDNGNEMVIGMKDGGFIAFDDIDLTQITKLAVSVGSKAGQSAGGTLEVRLDGAAGA
KIGEGKVDKSETISIPVKAPADGKLHKVYFIFKNALAGSKPLFSIESIQFENAVL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatccccttttcaaaaagtattaaagcatttcaggattgccggtgtggctgcc
ctggcctgttgcagtctggcggcaactgcccagacggtgacgccggagaagcgcgtgctg
gtattctcgaaaacagccgggttccggcattcgtctatcccggcagggaaaactgccatt
ttaaagctggggaaagagaccggtttttcggtggatactaccgagaactcggctgttttt
acgaataaaaatctgcaaaaatacgctgcggttgtattcctgaacaccaccggcaatgtg
ctgaacgacaagcagcaggatgcatttgagcgatacatccaggcgggcggcggctacgtg
ggcatccacgccgcaaccgacaccgaatacgaatggccgtggtataacaaactcgccggc
gcgcaattcctgagccatcctggcaacccgaatgtgcaggaaggcgaggcatttgttgtg
aacgaccagcatccttcgatggatggttttccaaaaaaatggaagatcaaggatgaattt
tacgacttcaaaaacttcaatgaaaaagtaaatgtcctcgtgaagatcgatgaaaagact
tacagggacggcaaaatgggcgataaccacccaatgtcgtggtaccacgaatttgacggt
ggtcgtgcattctacaccaacttcgggcacgaagatgcgactttcatcaaccctgttttt
gtaaaacacctgaccggtggattgaactgggcgatggcttccaagctggattatgccaaa
tcacggccggaagagaaccgttttaccaaaaaagtactggttaccaaactggatgagcct
actgaactggtagttctggatgatcagcgtgtacttctgactgagcgcaagggaaaagta
aagctttacaatcccaaaaccggaaaggtgaaactggtggccgaagtacccgtttatacc
aagcaggaatatggcctgatggggctgaacatcgaccccaacttcaagaccaacaagctg
gtatatatgtattattctcccccatcgaccgcggccgacactgctcagcatttgtcgcgc
ttcaaatacgatgatgtaaaggatacattgctgctcagcaccgaagagctcatgctcacc
gtgcccgtgaagcgcacggattgctgccataccggcggatcaattgcctgggatgcgaaa
ggtaatctctacttatccaccggtgacgacgtgaacccgttccaatcaaacggttatggg
ccgatcgacgagcgtccgggacgtgaaggctgggatggacagcatacttcatcgaacact
aattcattgagaggcaaagtattgcgcattaaaccgcgttacggcgaccgtcgtgcgaac
atgccgggcggtactaacctatacgatattccagagggcaacctcttccctcccggaacg
gaaaagacgcgtcctgaaatctacgtgatgggtacccgcaacccttaccgcatttcggtg
gaccagcacacgggctatttgtattggggtgatgtgggcccggatgcgtccaacgacgat
ccgaaacgtggtccgagagggtatgacgaggtaaaccaggcccggaaagcgggttatttc
ggttaccctttgttcattggtaacaaccgtccgtacattgatttcaacttcgccgacagc
acttccggcaagccgtttgatccattgaagccgatcaacaattcgccgcacaacaccggt
ttgcaagaattgccgcctgcgcagcccgcattcatctattatccttatgccgattctccc
gagttcggcccgatcgtaggtaaaggcggacggaatgcaatggccggcccggtttactat
tccgctgactttcaggacagcaaggtgaagtttccttcgtattacaatggcaagttcttc
gcttacgactggattcgtgattacatcaacatcgtgaccatgaacgagcaaggcgacctg
caaagcatcgagcgcttcatgccgggcacgaagttcagccatccgatcgacatgcagttt
gccaaagacggctcattatatacattggaatacggccccaactggtttgcccaaaacgac
gaagcgagcctttcgcatattacattcaacgcaggaaaccgcgttccggtggcaatcgca
agcgcaaccaacacgacaggcgctaccccattgaaagtcaatttctcttccaaaggctcc
atggatcacgacggcgacccgattaaatacgaatggtcgtttggaaaaggcctgccaaaa
agtacggttgctaacccaagctacacgtacgctaagccaggcgaatacaccgccactctc
aaagtgaccgataatgccggtaattccaacacctctgaagtgatcgtacgcgtcggtaac
gcgatcccgaaagtggatgtagcgatcaaaggcaacaagacattctactggaacgacatg
cctgtaaactacgaagtatccgtgtcggacaaggaagacggtagcctggcgaacaagaaa
attccggaagacgaagtgactttgacgatcaattaccttgaaggatttgacaaaacgcag
ctcgcgcaaggccatcaggccaatacaggcttcgaaaccggcaagcggatgatcgagctg
agcgattgcaaggcatgccattcggtcgacaaaaagtccatcggaccggcttatcgcgaa
gtagcgaagaaatacgccagcgagcgcaattcactgaaaacgctcacagacaaaatcctg
aaaggcggaagcggcgtttggggcgagcaggcaatgccgggtcacccgcagcacaagccg
gaagagatcgaagaaatggtgaagtacatcctcgacctcaacaatacaaaagccgttgac
aaaaagccgttgaaaagctcatacgtgacgcaggctaaaaagaaagacggttcgtacatc
ttcacggccagctacaccgacaggggcaacggcacaatgggtccattaaccggctcgaaa
accgttgcgctccgtccatccacattaatggcaaatatggcggataccaccagaaacacc
ttcaaatacaaaggcgataatggcaacgaaatggtgattggtatgaaagatggcggcttc
atcgccttcgacgacatcgacctcacccaaatcacgaaactggcagtttccgtgggcagt
aaagccgggcaatcggccggtggaacgctggaagtgcgcctcgacggggcggccggtgcg
aaaatcggcgaaggcaaggtcgataagtccgaaacaatcagcattcctgtgaaagctcct
gcggacggtaagttgcataaagtgtattttatatttaaaaatgcattagctggcagcaaa
ccgctgttttcgattgaatcgattcagtttgagaatgccgtattgtaa
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