Dyadobacter fermentans: Dfer_5444
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Entry
Dfer_5444 CDS
T00970
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfe03000
]
Dfer_5444
Transcription factors [BR:
dfe03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dfer_5444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
HTH_8
Mg_chelatase
AAA_16
AAA_7
AAA_2
IstB_IS21
AAA_3
bpMoxR
GAF_2
MCM
AAA_22
Parvo_NS1
DNA_PPF
GAF
Motif
Other DBs
NCBI-ProteinID:
ACT96636
UniProt:
C6VUF4
LinkDB
All DBs
Position
6568101..6569648
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AA seq
515 aa
AA seq
DB search
MPDNLDLAERERMSFLLDFSQDIAAVRTKADLEAAISNALQRLLSTRLAMIRVIGDDGET
LVPYLWDISLFSRVKGLFDQLTSRRTTVTDYFFAQVLASAEPIVFDIAEEERKGNSPEYI
LFFKQLGLKQVYASALRVGAENLGTMFFLSDYLDIALLKGLCAQISTAISNILANEKILA
YKQLLEIENDQLKEQIRTIYNFSEIVGSGPEMQEVYHLMSLVADSSSTVLLLGETGTGKE
LIARAIHNTSPRRDRLMVKINCAALPANLIESELFGHEKGAFTGAVERRIGKFELAHKST
LFLDEIGEMPLEAQVKLLRVLQEKELERIGGKTTVKVDVRIIAATNRDLEEEVRAGRFRS
DLYYRLNVFPITLPPLRDRRDDIVPLAHFFMNRYSKNSGRKVTGIAPEIIRELLAYSWPG
NVRELEHLIERTVLLTRDHVIRQIHLPKERAAEKDSPALPSQTLSEMERAYIIDVLRQFE
GKISGMDGAAEFLDIPATTLHSKIKKLKISKSDYY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataatctggacctggctgaaagggaacggatgtctttcctgctggatttcagc
caggacatcgccgcggtgcgcaccaaggcggacctggaagcagccatttccaatgctttg
cagcgcctgctgagcacccggctggcgatgatccgcgtgatcggcgacgatggcgaaacc
ctggtgccctacctttgggatatttcgcttttttcacgcgtgaaagggcttttcgaccag
ctcacgtcccgccgcacgaccgtcacggattactttttcgcacaggtactagccagtgcg
gaaccgatcgtttttgatatcgccgaagaggagcgcaaaggcaacagcccggaatacatt
ttgtttttcaaacaattgggcttgaagcaagtgtacgcctcggcgctgcgtgtgggtgcg
gagaacctcgggacaatgttcttcctctcggactacctcgatatcgccctgcttaaagga
ctttgtgcgcagatttccaccgcgatttccaatattctggccaacgaaaagatattggct
tacaagcagttgctcgaaatcgagaacgaccagctcaaagaacagatccggacgatttac
aacttttccgaaatcgtaggaagcggacccgaaatgcaggaggtttaccacctgatgtcg
ctcgtggccgactcgtcgtcgacggtgctgctgctcggtgaaacgggtacgggcaaggaa
ctgatcgcccgggcaatccacaacacatcgccccgcagggacaggctgatggtgaagatc
aactgcgccgcattgccggccaacctgatcgaaagcgaattgttcggccacgaaaagggc
gcgttcaccggggcggtcgagcggcggatcggtaaattcgagctggcccacaaaagcacg
cttttcctggacgaaatcggtgaaatgccgctcgaagcccaggtaaagctactccgcgtg
ttgcaggaaaaggaattggaaagaataggcgggaaaacgaccgtgaaagtggatgtacgc
atcatagcagccaccaaccgcgacctggaagaagaagtgcgcgccgggcgctttcgctcc
gacctctattaccggctaaacgtgttcccgatcacattgccgcctctccgcgaccggcgc
gacgacattgtcccgctggcgcatttttttatgaaccggtatagtaaaaattccggccga
aaagtgacgggcatagcgcccgaaatcatccgggaactgctggcatactcctggccgggc
aacgtccgcgagctcgaacacctcattgagcgcacggtgctgctcacaagggatcatgtg
atccggcagatccaccttcccaaagaacgtgcggcggaaaaagattcgcccgcattgccc
agccaaaccctttccgaaatggagcgcgcctacattatcgacgtgctcaggcagtttgaa
ggtaaaatatccggaatggacggcgctgcggaattcctcgacatcccggctacgacattg
cattcgaagattaaaaagcttaaaatctccaagtcggattactactga
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