Dyadobacter fermentans: Dfer_5704
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Entry
Dfer_5704 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_5704
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_5704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACT96893
UniProt:
C6VXZ2
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All DBs
Position
complement(6855047..6856741)
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AA seq
564 aa
AA seq
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MKKKLTTIFTVAGLLMLSNACTDLKEQVLDETLSAKLSEEETVNGLLAPTYALLPNLFQH
TTYFALQEISTDEAILPYRGGTDWGDNGIYLALHAHNTTSTDPNVNNTWNQLVQSISRCI
TAIEGLKTATSPNTALYTAEARGMRAYYNMVMLDLFGIAFVKEEPGTTSKIIRGDEAVKY
IESEFLAVEPVLRPKATVGPGRLNQAAVWSLLARLYLNAAVYRNIYAPTFDFKAEDMDKV
IQYTDKVINSGQAKLSPDYFAIFGNDNHTNEELIFAVDQRADLNGHNRMAYFSISGDQFP
LAEFPAANGTDGPGITSDFYQTWVQAYGAVDPSRDPRFYQQNMSIYTNAADTCVNDADYK
INRGILRGQQYGALRVNGAFLRCPDGKLKVGKLTYVTRNRSDLPVSFSEMIDFTTAGSNY
NTGYRVEKYEFSSKSNTGRNRGEADIVIVRLADVYLMRAEAKLRKSNDAAGALADVNLVR
ASRTKTLAPPALTSMTLDLLFRERGFEFYWEMLRRPDMIRFGKYEGKWTEKTNADVKKRI
FPIPQTAIDGASNLPGYLQQNDGY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaattaacaaccatattcacggtggccggcctgctcatgctgagtaacgcc
tgtaccgacctgaaagaacaagtactggacgaaacgctgagcgcgaaactttcagaagaa
gaaaccgtcaacggcttgctggcgcccacgtacgcattgctgccgaacctgttccagcac
acgacctacttcgcattgcaggaaatctcgaccgacgaggcgatccttccctaccgcggc
ggcaccgactggggcgacaacggcatttacctcgcattgcacgcccacaacaccaccagc
accgacccgaatgtgaacaacacctggaaccagttggtacaatccatttcaaggtgtatc
acggccattgaaggcctgaaaaccgccacttcgcccaatacggcactttacacggccgaa
gcacgcggaatgcgcgcctactacaatatggtgatgctcgacctattcggcattgcgttc
gtgaaggaggagccgggaacgacttcgaagatcatccgcggcgacgaagctgtgaaatac
attgagagcgaattcctggccgtggaacccgttttgcgcccgaaagctaccgtaggcccc
ggccggctcaaccaggctgccgtgtggagcttgctggcacgtttgtatctcaatgcggca
gtgtaccgtaacatttacgcgcctaccttcgactttaaggcggaggatatggacaaggtg
atccagtataccgacaaggtgatcaactcgggccaggcgaaactttccccggattatttc
gcgattttcggcaacgataaccataccaacgaagagcttattttcgcggtagaccagcgt
gccgatctgaacggacataaccgcatggcctatttctcgatctcgggtgaccagttcccg
ctggcagaattcccggcggccaatggtaccgacggcccgggcatcacttcggacttctac
caaacctgggtgcaagcttacggtgccgtggacccatcccgcgacccgcgtttttaccag
caaaacatgtcgatttacaccaatgcagccgacacctgcgtgaacgacgcggattataag
atcaaccgcggtattctcagaggccagcaatacggcgcattgcgcgtgaacggcgcattc
ctccgctgccccgacggcaagctgaaagtgggtaaactgacctacgttaccagaaaccgc
tccgatttaccggtaagtttctccgaaatgatcgacttcaccaccgcaggcagcaactat
aacaccggctaccgcgtggagaaatacgagtttagcagcaagtcgaacacgggccgtaac
cgcggagaagcggatatcgtgatcgtgcgcctggccgacgtttacctcatgcgcgccgaa
gccaagctccgcaaaagtaacgacgcagcaggtgccctggccgacgttaacctcgtacgt
gcctcacgtaccaaaacgctcgcgccgcctgcattaacgagcatgaccctcgacctgctc
ttccgtgagcgcggtttcgagttctactgggaaatgctgcgccgcccggatatgatccgc
tttggcaagtatgaaggcaaatggaccgaaaaaaccaatgcagacgtgaagaaacgcatc
ttcccgatcccgcaaacggccatcgacggcgcgtccaacctgcctggctatttgcagcag
aatgacggatattga
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