Desulforamulus ferrireducens: B0537_02085
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Entry
B0537_02085 CDS
T04823
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dfg
Desulforamulus ferrireducens
Pathway
dfg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0537_02085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfg03021
]
B0537_02085
03400 DNA repair and recombination proteins [BR:
dfg03400
]
B0537_02085
Enzymes [BR:
dfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0537_02085
Transcription machinery [BR:
dfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0537_02085
DNA repair and recombination proteins [BR:
dfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0537_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AQS57991
UniProt:
A0A1S6IT86
LinkDB
All DBs
Position
399396..400343
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AA seq
315 aa
AA seq
DB search
MLEIEKPKIEIVEQSEDNTYGKFVVEPLERGYGITLGNSLRRILLSSLPGAAVTSVKIEG
VLHEFSTIPGVREDVTDIILNLKNLCLKIHSDEEKVLRVEAQTEGPVTAGDIITDADVEI
LNPELHLATLDTGARLFMEITVNKGRGYSSAEKNKKGEHIIGVIPIDSIYTPVRKVNYTV
ENTRVGQITDYDKLTLEVWTNGSIRPDEATSLSAKILSEHLRLFMGLTETVNDVEIMVEK
EEEQKDKILEMTIEELDLSVRSYNCLKRAGINTVEELIQRNEEDMMKVRNLGKKSLEEVV
NKLHELGLSLRNDDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgttggagattgaaaagccgaagattgagattgtggaacagagtgaggataacacctac
ggtaaatttgtagtagaaccgttggagcgaggctatgggattaccctaggcaattctctg
cgtcggattctactttcctctctacctggagctgctgtaacctcagtgaaaattgaaggt
gtgctacacgaatttagcactattccaggagttcgggaggacgttaccgatattatcctg
aacctgaaaaatctttgtctcaagatacacagcgacgaggaaaaggtactcagggtagaa
gcccaaaccgaaggccccgtcactgccggtgacataataactgatgcagatgtggaaatc
ttaaacccagagcttcacttggcaaccctggatacaggtgcccgtttgtttatggaaatt
accgtaaacaaaggtcgtggctattcttccgctgagaagaataaaaaaggtgaacacatt
attggtgtaattcccatcgattcgatttatacaccggtacgtaaggtgaactacactgtg
gagaacacccgtgtaggtcagattacagactacgacaagctcactcttgaggtctggacc
aacggcagtatccgaccggacgaggccaccagtctatcagccaaaattttaagcgagcat
ctaagactgtttatgggattaaccgaaaccgttaacgatgtggaaattatggttgaaaaa
gaagaggagcaaaaggacaagattctggaaatgaccattgaggaacttgacctgtctgta
cgctcctacaactgcctgaaacgggctggtatcaacacggtagaagaactaattcagcgt
aatgaagaggatatgatgaaagttcgtaaccttggtaagaaatcgctggaagaagtagtt
aataaattacacgagttaggcctgtcactaaggaatgacgacgagtaa
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