Desulforamulus ferrireducens: B0537_07490
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Entry
B0537_07490 CDS
T04823
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dfg
Desulforamulus ferrireducens
Pathway
dfg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0537_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfg03400
]
B0537_07490
Enzymes [BR:
dfg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B0537_07490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B0537_07490
DNA repair and recombination proteins [BR:
dfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B0537_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
eIF-5_eIF-2B
Ribosomal_S13
C1_2
Motif
Other DBs
NCBI-ProteinID:
AQS58941
UniProt:
A0A1S6IVY9
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Position
complement(1512973..1513806)
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AA seq
277 aa
AA seq
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MPELPEVETVVRSLEQHLAGLTVTSVNLIKPEVIRSPKPEEFIELLLGKTFLKKMGRRGK
YILLNLSENLTLVVHLRMTGRLIYCDAEAPLEKHTHVIFLLDNGKHLRFADVRRFGRLQL
VPTTEVMELPGIKELGPEPLEPEFTREFIKKEIRRHRTRIKPLLLDQSFIAGLGNIYADE
ALFRAKVHPERLASELTSREAAALHKAIVEVITEGIEHRGTSFRDYVDGEGRAGSFQNHL
KVYNRENHPCTQCGRPISRIKVAGRSSYYCSACQKAK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaattgccagaggtggaaaccgtggtacgttccttagaacaacacttggccggt
ctgaccgttaccagtgttaatcttatcaagccagaggttatccgcagccccaagcccgag
gaatttattgaactcctcctgggcaaaacatttctgaaaaaaatggggcgccggggcaaa
tatatcttgctcaacctcagtgaaaatcttaccctggtggttcacctccgtatgacaggg
cgactaatctattgtgatgctgaagctcccttagaaaaacatacccacgtgattttttta
ctggataacggcaagcatctgcgttttgccgatgttcgacgctttggtcgcttacagttg
gtgcccactacagaggttatggaactaccaggtatcaaagaactgggaccagaacccctg
gaaccggaatttaccagggaatttattaagaaggaaatacgtcggcaccgcacccgcatt
aaaccactgctcttagaccaaagctttattgccggtttaggaaatatctacgcagacgaa
gccttgttccgggctaaggtgcatcccgagcgtttagcctcagagcttacttcccgtgag
gccgccgcgcttcataaggccattgtggaggttattactgagggtatcgagcacagaggc
acttccttccgagactatgtagacggagaaggacgggccggtagcttccaaaatcacctg
aaagtatataaccgggaaaaccacccatgcacccagtgtggccgacccatttcccgcatt
aaagtggccggacgcagttcctattactgcagtgcctgccaaaaagccaaatag
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