Desulforamulus ferrireducens: B0537_09535
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Entry
B0537_09535 CDS
T04823
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfg
Desulforamulus ferrireducens
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfg03009
]
B0537_09535
Enzymes [BR:
dfg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B0537_09535
Ribosome biogenesis [BR:
dfg03009
]
Prokaryotic type
ribosomal protein modification factors
B0537_09535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AQS59307
UniProt:
A0A1S6IWZ8
LinkDB
All DBs
Position
complement(1962814..1964148)
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AA seq
444 aa
AA seq
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MATVGLISLGCPKNLVDSEVMLGLLRDAQHHITNQATEADVLIVNTCGFIESAKEESIRH
IFELAQHKETGKCQALIVTGCLAQRYHRELMEEIPEIDALVGPGQITGIVDVIEDCLSQG
ERKAHINEPLYLYDEHSPRLLSTPPYTAYVKIAEGCDNRCAYCAIPDIRGNFRSRTLESV
EAEVRKLVGQGVKEIILIAQDTTRYGQDLYGEYRLAELIKRISPIAGLEWIRLLYCYPNR
FTQELIDVIAQTPNVCKYIDLPLQHASDDILKAMKRPVNQQQARELIGTLRSKIPGIVIR
TSFIVGFPGETEQQFLELLKFMEEVQFDRAGVFTYSQEEGTPAATMDNQLAEEIKQERYH
RAMQLQKEISLKRNQQRIGERVEVLVEEVIDAAKMVYAGRSAYDAPEIDGTVEFTSPRTL
QPGDLVIVKINRALEYDLMGELAQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtaggattaatcagtttaggctgcccgaaaaacctggtggattccgaagtt
atgctaggcctgctgagggatgctcaacaccatattaccaatcaagcgaccgaggcagat
gtattaattgttaatacctgcggttttattgagtctgctaaggaagaatccatccgacat
atttttgaattagctcaacataaagaaacaggcaaatgccaggctttaattgtcactggt
tgtttagcccaacgctatcatcgtgagctgatggaagaaataccggaaattgatgctttg
gtggggccggggcaaattactggtattgtggatgtcatcgaggactgtctgtcccagggg
gaaagaaaggctcatatcaatgaacccctttatctttatgatgaacattcccccaggtta
ctcagtactcccccctatacagcctatgtaaaaattgctgaaggctgtgataatcgctgt
gcctattgtgcaattcctgatattcggggtaatttccgcagtaggacgctggaatcagtg
gaagcggaagtaaggaaattggtggggcaaggagtaaaggaaattattttaattgcccag
gacaccactcgctatggccaggacctctatggtgaataccgtttggcagagctgatcaaa
agaattagtcccattgcaggtttagagtggattcgtcttttgtattgttatcccaatcgg
tttacccaggaactaattgacgtcatagcgcaaacacctaatgtttgtaagtatattgat
ttacccttgcaacatgcctcggatgatatactaaaagccatgaaacgtccggttaatcaa
cagcaagcccgggaactgataggaactcttagaagtaagataccgggaattgttatccgt
acctcctttatcgtgggatttcccggcgaaaccgaacaacagtttttagaactgctcaaa
tttatggaagaagtccagtttgatcgagcaggagtctttacctactcacaggaggaggga
actcctgcagccaccatggacaatcaacttgcggaagaaattaagcaggaacgttatcac
cgagccatgcaattacaaaaagagatttctctcaaacgtaatcagcagcgcattggtgaa
agggtagaagttttagtggaagaagtaattgatgctgctaagatggtttatgccggtcgt
tccgcctacgatgcccctgaaattgatggcactgtggaatttaccagcccaagaactcta
caaccgggtgacttggttattgtgaaaataaacagggccttggagtatgatttgatggga
gagttggcccaatga
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