Desulforamulus ferrireducens: B0537_09680
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Entry
B0537_09680 CDS
T04823
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dfg
Desulforamulus ferrireducens
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfg03016
]
B0537_09680
Enzymes [BR:
dfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B0537_09680
Transfer RNA biogenesis [BR:
dfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0537_09680
Prokaryotic type
B0537_09680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Motif
Other DBs
NCBI-ProteinID:
AQS59334
UniProt:
A0A1S6IX29
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All DBs
Position
complement(1989901..1990833)
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AA seq
310 aa
AA seq
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MDGIITILKPPGMTSHDVVAYVRRLTKVKKCGHTGTLDPGAAGVLPVCLGRATKLASFVT
AGDKTYRAELTLGIATSTQDGFGEIVRQVDASSVTLAQFLEVFYSMRGEIEQIPPMSSAI
KVDGKKLYELERAGKTIDVPSRKVTIIDLKVINSWDWATPQPRVLFDVTCSKGTYVRTLC
SDIGKALGCGAYMSFLLRSRVANFDLQQAITLEQLTELVEKNQLTQALIPMVQAVAHLPA
VEIYSTAVKSISSGGTLYPSGIHRMAQQITPEELVRIQYNNQLLGIFRAKQENQEATARM
IFRPEVVFST
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtattatcaccatccttaaaccccccggtatgacttcccatgatgtagtggcc
tatgtgcgaaggttgaccaaggttaagaagtgcggacacacaggcacccttgatcccggg
gctgccggtgtactacctgtttgcctgggcagagccactaaactagcaagctttgttacg
gcaggagataaaacctaccgggcagagttgaccttaggtattgccaccagtactcaggat
gggtttggcgaaattgttaggcaagtggatgcttcttccgttaccttggcacagttttta
gaggttttttattctatgcggggtgagattgaacaaattccacctatgtcctcagccatt
aaagtagacggcaaaaaattgtacgaattagagagggcaggcaaaaccatagatgtgccg
agtcgtaaagtgaccattattgatctcaaggtaataaatagttgggactgggcaacacca
cagccaagagttttgtttgatgtgacctgttcaaaggggacatatgtgcgtaccctgtgc
tcagatataggtaaggcattgggttgtggcgcttatatgtcctttttgctgcgttcccgg
gtggctaattttgatctgcagcaagccattaccctggagcaattaaccgaactggtggag
aagaaccaactgacccaggctctaatacccatggttcaagctgttgcccatttaccggcg
gtagaaatatattctactgcggtaaagtcaatttcctccggcggtaccctgtacccctcc
ggtatccataggatggcgcaacagataacaccggaagaactagtgagaattcaatataac
aatcagttactggggatatttagggccaaacaggaaaatcaggaagcaacagcaagaatg
attttccggcccgaagtggttttttctacttag
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