Desulforamulus ferrireducens: B0537_09840
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Entry
B0537_09840 CDS
T04823
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dfg
Desulforamulus ferrireducens
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfg03032
]
B0537_09840
03400 DNA repair and recombination proteins [BR:
dfg03400
]
B0537_09840
Enzymes [BR:
dfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B0537_09840
DNA replication proteins [BR:
dfg03032
]
Prokaryotic type
DNA Topoisomerases
B0537_09840
DNA repair and recombination proteins [BR:
dfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B0537_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
HVO_2753_ZBP
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
AQS59366
UniProt:
A0A1S6IX52
LinkDB
All DBs
Position
complement(2023917..2026154)
Genome browser
AA seq
745 aa
AA seq
DB search
MSKTLVIVESPAKAKSISKYLGRNFTVKASMGHLRDLPKSQFAVDVENNFTPKYIAIRGK
GDIIKDLRSSVKKVDRVLLASDPDREGEAIAWHLTKLLDIDEHTPCRIEFNEITKNAIQQ
AVKHPRPIDIDRVNAQQARRILDRLVGYNLSPLLWRKIKKGLSAGRVQSVAVRLICDREE
EIQAFIPEEYWTLTAKFVKAGKSPFEAKLNKYQNKKIEIANKESMERILADLQGASYQVT
NITRKEKLRNPAAPFTTSSLQQEASRKLNFTSRKTMVVAQQLYEGIELGKQGPMGLVTYI
RTDSTRVSETAVEEARGFILERFGPAYLPKEPRQTVAKGKVQDAHEAIRPTSVSLEPESV
KQYLTNDQYKLYKLIWARFVASQMASAIIDTTSIDIAAGDYSFRASGSIVKFPGFMQVYI
EGNDDGSKDEEKLLPEMNEGDKLEAKSLTPKQHFTQPPPRYTDATLVKTLEEKGIGRPST
YAPIVETIQKRGYVVRENKQFYPTELGMIVVEMLKNHFPDIINVEFTADMEEKLDQIAEG
DQEWSEVLREFYLPFKETLEKAEEVIGKVKVADEVSEEICEQCGKNMVIKLGRFGKFLAC
PGFPECRNTKPLLEPTGVACPKCDGEMVIRRSKKGRKFYGCSKYPECQFVTWDAPTNEKC
PHCGFMMVEKNSRGKEKQLLCANEECPSKGMAGADDTDTKQGKSTTKAATKTAAKKTTKT
AAKGAHSKETPPTTIVAKAANRQEE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaacattagttattgtggaatctcctgctaaagcaaagagtattagcaagtat
ttaggaagaaatttcacagttaaagcatccatgggtcatctgcgggatttacctaagagc
cagtttgccgtagatgtagagaataattttactcctaaatacattgccattagaggtaag
ggggatatcattaaggatctgaggtcctcagtaaagaaggttgatcgtgttttactggcc
tctgacccggaccgggaaggggaagccattgcctggcatttaaccaaattgctggatata
gatgagcataccccttgccgtattgaatttaatgaaattaccaaaaacgctatccagcag
gccgttaaacacccccgtcccattgacatagatagagttaacgcgcaacaggccagaagg
attttggacagactggtaggctataatttaagtcctttgctttggcgtaaaataaaaaag
ggtttatctgcaggtagggtacagtctgttgctgtcaggctaatttgtgaccgagaagaa
gagattcaagccttcattcccgaagaatactggaccctgacggccaaatttgttaaagct
ggcaaatctccctttgaggctaagttaaataaatatcaaaacaagaaaattgagattgcc
aacaaagagtccatggagcggattctggctgatttacagggtgcctcttatcaggtaact
aatattaccagaaaagaaaaactgcgtaacccggcagcaccctttaccaccagttcgctg
cagcaagaagcatccagaaaactcaattttacttcacgtaagaccatggtggttgcgcaa
cagctttatgaaggtattgaattaggcaagcaaggtcccatgggtttagtgacctatatt
cgtaccgactcaaccagggtttcggaaacggctgtggaggaagccagaggcttcattttg
gagcgttttgggccagcctatctacccaaggaaccaagacaaacagtggcaaaaggtaag
gtgcaggatgctcacgaagctatccgacccacttcggttagtttagaaccggaaagtgtt
aagcaatatctcaccaatgatcaatacaaactgtacaaactaatctgggccagatttgtg
gccagtcaaatggcctcggccattattgataccaccagtatagatatcgcagccggtgat
tatagtttccgagccagtggctctattgttaagtttcccggctttatgcaagtctatatt
gagggaaatgacgatggcagcaaggatgaagaaaagctactaccggaaatgaacgagggg
gataagttagaggctaagtcgcttactcccaagcagcactttactcagcccccgccacgc
tatactgatgccaccttggtcaagacccttgaggaaaaggggattggacgccccagtacc
tatgcgcccattgtggaaaccatccaaaaaaggggatatgtggtaagggagaataaacaa
ttttatccaactgagttgggtatgatagttgtggaaatgctcaaaaatcactttcccgac
attattaatgttgaatttaccgccgatatggaagagaaattagatcaaatagccgaaggg
gatcaggagtggtcggaggttttaagggagttttatctgccctttaaagaaaccttagaa
aaagcagaagaggttattggtaaagttaaggtggcagatgaagtatctgaggaaatctgt
gaacaatgcggcaaaaatatggttattaaactaggacgctttggtaagtttttggcttgc
cctggttttcccgagtgccgcaacaccaagcctttgctggagcccaccggagtagcttgt
cccaagtgtgatggggaaatggtcatcagaagaagtaaaaagggtcgtaagttttatggc
tgtagtaaatatcctgaatgtcaatttgttacctgggatgcacctactaatgagaagtgc
ccccattgcggttttatgatggtggagaaaaatagccggggtaaggaaaaacaactgcta
tgtgccaacgaggagtgccctagcaaaggaatggccggggccgatgacacagacaccaag
caaggaaagtccactaccaaggcggcaactaaaaccgcggccaagaaaacaacgaaaact
gctgccaaaggggctcatagcaaggagacaccaccaactacgatcgtagcaaaagcagca
aacaggcaagaggaataa
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