Desulforamulus ferrireducens: B0537_12185
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Entry
B0537_12185 CDS
T04823
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfg
Desulforamulus ferrireducens
Pathway
dfg03420
Nucleotide excision repair
dfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0537_12185
03430 Mismatch repair
B0537_12185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfg03400
]
B0537_12185
Enzymes [BR:
dfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0537_12185
DNA repair and recombination proteins [BR:
dfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0537_12185
MMR (mismatch excision repair)
Other MMR factors
B0537_12185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AQS59769
UniProt:
A0A1S6IYB5
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All DBs
Position
complement(2496567..2498744)
Genome browser
AA seq
725 aa
AA seq
DB search
MDILANLNPAQAEAVEHTAGPLLVLAGAGSGKTRVLTHRIAYILKQGVPPYNILAITFTN
KAAAEMRSRVEQLVPEAARDLWVTTFHSACLRILRREIRTLGYDTSFSIYDDADQQTLIK
ECLKELEIDEKRFQPRAMLAAISGAKNKLLTPAQYERGAFDYFEQVAARVYRSYQEKLFK
NNALDFDDLLMLTVRLFQENPHVLGYYQTKFKYILVDEYQDTNHSQYILVNMLAERHRNL
CVVGDPNQSIYKWRGADINNILSFERDYPEAKVVKLEQNYRSTGNILQAANAVIKNNVEA
KELKLWTSRGSGDLIHVFRAENERFEAHYIAERIKELRFTKNRKYNEMAILYRTHAQSRV
FEEVFLRLGIPYTIFGGLKFYERKEIKDLLAYLRVLVNPVDSQSLSRIINVPKRGIGAAS
LEKINNFAQERDLSLLLTLAMVDDIPGLPAKARKQCRLLADLLAQLKKQAQFLSVTEITE
EVIKTTGYRAELEAEDTVESRTRLENLQEFLTVTKEYDKQHGEEGGLEDFLSTISLVTDM
DRHDPEADQVVMMSLHSAKGLEFPVVFLTGMEEGVFPHSRALYDQEELEEERRLAYVGIT
RAEELLYFTHCWERTLFGRTNMNPKSRFLEEIPPELTVGQGPVKKAAPVSTSYTAFGTSP
KAATTAANPTAAKSFLLGDRVKHKKWGEGVIVKVKGEGADAELTVAFPSQGLKTLLAQFA
PLEKI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatatactagcgaacttaaaccccgcccaagccgaggcggtagaacatacggcagga
ccacttttggtgttggcaggggcgggatctggtaagaccagggtgttgacccaccgcatt
gcttacatcttaaagcaaggggtacccccctataacatattggccattacctttaccaat
aaagcagcggcagaaatgagaagcagggtagaacaactggtgccggaggcggccagggat
ctttgggtaaccacctttcacagtgcctgcttgcgtatcttaagaagggaaattagaacc
ctggggtatgatacgtccttttccatctacgatgatgcagatcaacaaaccctgatcaaa
gagtgcttgaaggaattggaaattgatgaaaagcgtttccagcccagagccatgctagct
gccatatctggtgcgaaaaataaactattgacgccggctcagtatgagagaggggccttt
gattattttgagcaggtggcggccagggtttatcgctcctaccaggaaaagttgtttaaa
aacaacgcactggattttgatgacttgctaatgcttaccgtccggctctttcaagagaat
ccccatgtattgggctattatcagaccaagtttaaatatattttggtggatgaataccag
gataccaaccatagccaatatatactggttaatatgctggccgaacggcatcgtaaccta
tgtgtggtgggggaccccaaccaatccatttataaatggcggggtgccgatattaataac
atcctgagttttgaaagggattatcccgaagccaaagtggttaagctggaacaaaactat
cgctccaccggtaatattttgcaagctgccaacgcggtgattaagaacaatgtggaggct
aaggaattaaagctctggacctctcggggctccggcgacctaatccacgtttttcgagcc
gagaatgaacgctttgaagcgcattatattgccgaacggattaaggagctacgttttacc
aagaaccgcaagtataatgagatggctatactctatcgtacccatgcccaatcccgtgtc
tttgaagaagtttttctacggttaggcataccctataccatctttggtggtcttaaattc
tacgagcgcaaagagattaaagatttactggcctacctcagggtactggtcaatcccgtg
gacagccagagcttaagtcgcatcatcaatgtgcccaaacgggggattggggcggcttcc
ttggaaaaaatcaataattttgcccaggagcgggacttatccctcttgcttaccctggct
atggtggacgacattccgggcctcccggccaaagcccgcaagcagtgcaggctgttggca
gacctgctggcccagttgaagaagcaggcacaattcctctcggtaactgaaattaccgaa
gaagtaatcaaaacaactggttatcgggcggagttggaagcagaggataccgtggaatct
cgtacccgcctggaaaacctgcaggaattcctgaccgtaaccaaagaatacgataagcag
catggtgaagaggggggcttggaggattttctctccaccatttctctggttactgatatg
gaccggcatgatcccgaggcagaccaagtagtaatgatgagtttgcactccgccaagggg
ttagaatttcccgtggtatttctcaccggtatggaagaaggggtctttccccacagccgt
gccctttacgaccaggaagaattggaagaggaacggcgcttagcctatgtgggtatcacc
agggcggaggaactgctatactttacccactgctgggaaagaactctctttggtcgcacc
aatatgaatcctaaatcccggtttttagaggaaatcccgccagagttgactgtgggacaa
ggtccggtcaaaaaagctgcccccgtcagtacaagttatactgcctttggcacatccccc
aaagctgctaccacagcggctaaccctacagcggcgaaatctttcttgctgggtgatcgg
gtgaaacataagaaatggggagagggagtcattgttaaggtaaagggtgagggtgccgat
gccgaattaaccgtagccttcccgtcccagggcttaaaaaccctcctggcccagtttgcg
cctttagaaaagatttaa
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