Desulfovibrio fairfieldensis: AXF13_02875
Help
Entry
AXF13_02875 CDS
T04293
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXF13_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfi03000
]
AXF13_02875
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_02875
Enzymes [BR:
dfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AXF13_02875
Transcription factors [BR:
dfi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AXF13_02875
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXF13_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AMD89140
UniProt:
A0A0X8JHX8
LinkDB
All DBs
Position
670545..672026
Genome browser
AA seq
493 aa
AA seq
DB search
MHGNYPGLYSAFCAKDPRFDGRFFVGVSSTRIYCRPVCRARTPKEENCAFFSSAAEAEQA
GYRPCLLCRPELAPGMSIADASASLAKRAARMIEENCGSGERLEQFAHRLHCTGRHLRRV
FEEEFHVSPVQYLQTCRLLLAKNLLTDTKLRVVDIAMAAGFGSLRRFNDAFKEKYHLTPG
DIRKRMSTTKREDAELKVSLGYRPPYRWKEMLRFLKGRAIAGIDLVRGDAYYRTVCLANT
RRMPVTGWIAVSNNEAEHILEVSLSESLLSVLPQLLGKVRNMFDLYCDPEAVFESLSSMN
AIRENLCMKGARLPGCFDSFEVSVRAILGQQVTVKAAGTLAERLVSRFGIPVATVVEGLS
RIFPPPEYFAGLDGPLEQRLGPLGITASRAGAIEALAKALARREICLDGCSDPEQETRKL
MGIRGIGTWTANYIAMRAMAWPDAFLETDAGIRHALPRYSPRELRIMAEQWRPWRSYAAV
NLWNSLHATDDNG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcaactatccaggactctattccgccttttgcgcgaaagatccccgttttgac
ggcagattttttgttggcgtgtcttccaccaggatatattgccgtcccgtgtgccgggcc
aggacgcccaaagaggagaactgcgcttttttttcctcagcggcggaggctgaacaggcg
ggctacaggccatgcctgctttgccggccggaacttgctccggggatgtcgattgccgac
gcttccgcatccttggcgaaacgcgctgcaagaatgatagaggaaaactgcggaagcggt
gaaagactggagcaatttgcgcaccgcttacattgcacgggccgtcatcttcgtcgggta
tttgaagaagaatttcatgtttcaccagtacaatatttgcagacctgtcgtctgcttctg
gcaaaaaatcttttgacggacacaaaattgcgggtcgtggatatcgccatggctgccggt
ttcggcagcttgcgccgatttaacgatgccttcaaagaaaaataccacctgacgcctggc
gacatccgcaaaaggatgtccaccacgaaacgagaagacgcggagctgaaagtctccctt
ggttaccggccgccgtaccgctggaaagagatgctgcgatttttgaaagggcgcgcaata
gctggaattgatctggtcaggggagatgcttattaccggacggtttgcctcgcaaacaca
aggcgaatgccggtgacgggatggattgccgtttcaaataacgaagctgagcatattctg
gaggtgtctctaagcgagtcgcttttatccgttcttccacagctgcttgggaaagtccgg
aatatgtttgatctatattgtgacccggaggcggtgtttgaatcgctatcctccatgaat
gccatccgggaaaacctttgcatgaaaggcgcaaggctccccggctgctttgattccttc
gaggtatccgtcagggcaatcttggggcagcaggtcacggtaaaggcggcgggcactctt
gcggaacggcttgtcagccggttcgggattccggtggcgacagttgttgaaggtctgtcg
cgtatatttccgcccccggaatattttgccggtcttgatgggccactggaacagcgcctg
gggccgctcggcatcaccgcttccagagcaggagccatagaggcgctcgccaaggctctt
gcaaggcgggagatctgtttggacgggtgcagcgacccggaacaggaaacgcggaaactt
atgggcatcaggggaatcggcacatggacggcaaactatatcgctatgcgggccatggcc
tggccagacgcgtttctggaaacagacgcgggaatacggcatgcattgccccgatattcc
cccagagagctgcgtatcatggccgaacaatggagaccgtggagaagttacgctgcggtc
aatctctggaacagcctgcatgccactgatgacaacggataa
DBGET
integrated database retrieval system
