Desulfovibrio fairfieldensis: AXF13_03850
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Entry
AXF13_03850 CDS
T04293
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi00260
Glycine, serine and threonine metabolism
dfi00630
Glyoxylate and dicarboxylate metabolism
dfi00670
One carbon pool by folate
dfi00680
Methane metabolism
dfi01100
Metabolic pathways
dfi01110
Biosynthesis of secondary metabolites
dfi01120
Microbial metabolism in diverse environments
dfi01200
Carbon metabolism
dfi01230
Biosynthesis of amino acids
dfi01240
Biosynthesis of cofactors
dfi04981
Folate transport and metabolism
Module
dfi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AXF13_03850 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AXF13_03850 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AXF13_03850 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AXF13_03850 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AXF13_03850 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AXF13_03850 (glyA)
Enzymes [BR:
dfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AXF13_03850 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMD89312
UniProt:
A0A0X8JIL0
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All DBs
Position
complement(882794..884032)
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AA seq
412 aa
AA seq
DB search
MDEILLQDPELARAIILESDRQVSKLELIASENFVSPAVREAQGSVLTHKYAEGYPGKRY
YGGCEYVDIAETLAQDRAKQLFGCGYVNVQPHSGSQANMAAYFACLKPGDVILGMNLSHG
GHLTHGSPVNFSGRLFKVVSYGVRKETGRIDYDEVAALAREHKPAVIMAGASAYPRRIDF
ARFRAIADEVGAKLMVDMAHIAGLVAVGLHESPIPHAHITTTTTHKTLRGPRGGMILSSE
DNAKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFAAYQQRVLDNTAALAQSMMDAG
FELVSGGTDNHLMLVDLTNKDITGKDAEQALDQAGITVNKNTVPFETRSPFVTSGIRLGT
AALTTRGLQQEDMRTVGGFIVEALEKRQDAQELTRIRKNVEDFARQFPLFTW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaattctgcttcaagatccggagctggcccgggccatcattctggaatccgac
cggcaggtgagcaaactggaactgatcgcctctgagaactttgtttcgcccgccgtgcgc
gaagcccagggcagcgtgctgacccacaaatatgccgaaggctatcccggcaagcgctat
tacggcggctgcgaatacgtggacatcgccgaaaccctggcccaggaccgggccaagcag
ctcttcggttgcggctacgtcaacgtgcagccccattccggttcccaggccaatatggcc
gcctatttcgcctgcctcaagcccggcgacgtgatcctgggcatgaatctctcccacggc
gggcatctgacccacggcagcccggtgaacttctcaggtcgcctgttcaaggtcgtttcc
tacggcgtgcgcaaggaaacaggccgcatcgattatgacgaagtggccgctctggcccgc
gagcacaagcccgccgtaatcatggccggggccagcgcctatccgcgccgcatcgacttt
gcccgcttccgggccatcgccgacgaggtgggggccaaactgatggtggacatggcccat
atcgcgggcctggtggccgtgggtctgcacgagagccccattccccacgcccatatcacc
accaccaccacgcacaaaaccctgcgcggcccgcgcggcggcatgatcctctccagcgag
gacaacgccaagaccctgaacagccagattttccccggcatccagggcggcccgctgatg
cacgtcatcgcggccaaggccgtggccttcggcgaagccctgcgcccggccttcgcggcc
tatcagcagcgggtgctcgacaataccgccgctctggcccaatccatgatggacgccggt
ttcgaactcgtctccggcggcacggacaaccacctcatgctggtggacctgaccaacaag
gatatcaccggcaaggacgccgaacaggccctggaccaagccggaatcacggtgaacaag
aacaccgtgccctttgaaacccgctcgccctttgtgacctcgggcatccgcctgggcacg
gcggccctgactacgcgcggcctgcaacaggaagatatgcgcacggtgggcggtttcatc
gtggaggctttggaaaaacgccaggatgcccaggagctgacccgcattcgcaagaatgtg
gaggacttcgcccgccagttcccgctgttcacctggtag
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