KEGG   Desulfovibrio fairfieldensis: AXF13_03850
Entry
AXF13_03850       CDS       T04293                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
dfi  Desulfovibrio fairfieldensis
Pathway
dfi00260  Glycine, serine and threonine metabolism
dfi00630  Glyoxylate and dicarboxylate metabolism
dfi00670  One carbon pool by folate
dfi00680  Methane metabolism
dfi01100  Metabolic pathways
dfi01110  Biosynthesis of secondary metabolites
dfi01120  Microbial metabolism in diverse environments
dfi01200  Carbon metabolism
dfi01230  Biosynthesis of amino acids
dfi01240  Biosynthesis of cofactors
dfi04981  Folate transport and metabolism
Module
dfi_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AXF13_03850 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    AXF13_03850 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AXF13_03850 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    AXF13_03850 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AXF13_03850 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    AXF13_03850 (glyA)
Enzymes [BR:dfi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     AXF13_03850 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AMD89312
UniProt: A0A0X8JIL0
LinkDB
Position
complement(882794..884032)
AA seq 412 aa
MDEILLQDPELARAIILESDRQVSKLELIASENFVSPAVREAQGSVLTHKYAEGYPGKRY
YGGCEYVDIAETLAQDRAKQLFGCGYVNVQPHSGSQANMAAYFACLKPGDVILGMNLSHG
GHLTHGSPVNFSGRLFKVVSYGVRKETGRIDYDEVAALAREHKPAVIMAGASAYPRRIDF
ARFRAIADEVGAKLMVDMAHIAGLVAVGLHESPIPHAHITTTTTHKTLRGPRGGMILSSE
DNAKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFAAYQQRVLDNTAALAQSMMDAG
FELVSGGTDNHLMLVDLTNKDITGKDAEQALDQAGITVNKNTVPFETRSPFVTSGIRLGT
AALTTRGLQQEDMRTVGGFIVEALEKRQDAQELTRIRKNVEDFARQFPLFTW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggacgaaattctgcttcaagatccggagctggcccgggccatcattctggaatccgac
cggcaggtgagcaaactggaactgatcgcctctgagaactttgtttcgcccgccgtgcgc
gaagcccagggcagcgtgctgacccacaaatatgccgaaggctatcccggcaagcgctat
tacggcggctgcgaatacgtggacatcgccgaaaccctggcccaggaccgggccaagcag
ctcttcggttgcggctacgtcaacgtgcagccccattccggttcccaggccaatatggcc
gcctatttcgcctgcctcaagcccggcgacgtgatcctgggcatgaatctctcccacggc
gggcatctgacccacggcagcccggtgaacttctcaggtcgcctgttcaaggtcgtttcc
tacggcgtgcgcaaggaaacaggccgcatcgattatgacgaagtggccgctctggcccgc
gagcacaagcccgccgtaatcatggccggggccagcgcctatccgcgccgcatcgacttt
gcccgcttccgggccatcgccgacgaggtgggggccaaactgatggtggacatggcccat
atcgcgggcctggtggccgtgggtctgcacgagagccccattccccacgcccatatcacc
accaccaccacgcacaaaaccctgcgcggcccgcgcggcggcatgatcctctccagcgag
gacaacgccaagaccctgaacagccagattttccccggcatccagggcggcccgctgatg
cacgtcatcgcggccaaggccgtggccttcggcgaagccctgcgcccggccttcgcggcc
tatcagcagcgggtgctcgacaataccgccgctctggcccaatccatgatggacgccggt
ttcgaactcgtctccggcggcacggacaaccacctcatgctggtggacctgaccaacaag
gatatcaccggcaaggacgccgaacaggccctggaccaagccggaatcacggtgaacaag
aacaccgtgccctttgaaacccgctcgccctttgtgacctcgggcatccgcctgggcacg
gcggccctgactacgcgcggcctgcaacaggaagatatgcgcacggtgggcggtttcatc
gtggaggctttggaaaaacgccaggatgcccaggagctgacccgcattcgcaagaatgtg
gaggacttcgcccgccagttcccgctgttcacctggtag

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