Desulfovibrio fairfieldensis: AXF13_05115
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Entry
AXF13_05115 CDS
T04293
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03030
DNA replication
dfi03430
Mismatch repair
dfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXF13_05115
03430 Mismatch repair
AXF13_05115
03440 Homologous recombination
AXF13_05115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfi03032
]
AXF13_05115
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_05115
Enzymes [BR:
dfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXF13_05115
DNA replication proteins [BR:
dfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXF13_05115
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXF13_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMD89543
UniProt:
A0A0X8JIP7
LinkDB
All DBs
Position
1193943..1194470
Genome browser
AA seq
175 aa
AA seq
DB search
MSVLSGPCVAIDFETSGYAAHSACAVGLARIEDGRVTDCFYRLLRPPSARVLFTEIHGLT
WPMLRDAPTFAQAWPEAGAILCGAHFLLAHNASFDRRVLLACCRAAGLPAPEAPFLCTLK
GSRRSLPLPSKKLNLVCEYFGIALNHHNAASDAQACAEVYLRLRGLGVTDAQMRL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtactgagcggcccctgtgtggccattgattttgaaacgtccggctatgcggcc
cacagcgcctgcgctgtgggccttgcgcgcattgaggacggccgcgttacggattgcttt
taccgtctgttgcggccgccgtccgcgcgcgtgctgtttacggaaatccacggcctgacc
tggcccatgctcagggacgcgcccaccttcgcccaggcttggccggaagcgggcgcgata
ttgtgcggagcgcattttctgctggcgcacaacgcctcctttgaccggcgcgtgctcctt
gcctgttgccgtgccgccggtctgcccgcgccggaggcgccttttctctgcaccctgaaa
ggttcgcggcgcagcctgcccctgccgtccaaaaaactcaatctggtctgcgagtatttc
ggcatcgcgctcaaccaccacaatgccgcctccgacgcgcaggcctgcgccgaagtctat
ctgcggctgcgcggcctcggcgtcacggacgcccagatgcgcctctga
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