Desulfovibrio fairfieldensis: AXF13_05475
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Entry
AXF13_05475 CDS
T04293
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03089
RNA polymerase sigma-32 factor
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfi03021
]
AXF13_05475
Transcription machinery [BR:
dfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXF13_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
CFAP58_CC
HTH_11
GntR
SsdA_C
Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AMD89606
UniProt:
A0A0X8JJ42
LinkDB
All DBs
Position
complement(1297147..1298295)
Genome browser
AA seq
382 aa
AA seq
DB search
MKKNNKIAPSTRHKSGKSNTAPKKVEPEIEVLEAPREAGEDEEQNLETLDLLDGEELAAG
EVLDVDDDKDAEPELALEEGSDGALPAPSVPRLPSPAGTRDSLHLYLREVSRFPMLKPEE
EHELALRVRDHNDPDAAFRLVSSHLRLVVRIAMDFQRRWMQNVLDLVQEGNVGLMRAVNK
FDPDKGIKFSYYASFWIKAYILKFIMDNWRMVKIGTTQVQRKLFYNLNRERQKLIAQGYD
PDAAMLSERLGVTEDQINEMDQRLASTDLSLNVQVGEDSGGASRMDFLPALGPGIEDTLA
SDEIAGLVRSRLKTIMPKLNEKEVYILQNRLLTDEPVTLREIGERYNVTRERVRQLEARL
LEKIRQHLTLDIKDFSDAWIQS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataataagatagccccctccacgcggcataagagtggaaaaagcaatacg
gcccctaaaaaagtcgagcctgaaatcgaagtgcttgaggctccgcgcgaagccggggag
gacgaagaacagaatctggaaacgctggatctgctggacggcgaagaactggcagcgggt
gaagtgctggatgtggacgacgacaaggatgccgagccggagctggccctggaggaagga
agcgacggcgcccttcccgccccgagcgtgccgcgtctgccctctccggcgggcacacgc
gacagcctgcacctctatctgcgcgaggtaagccgctttcccatgctcaagcccgaagag
gaacatgagctggctcttcgcgtgcgcgaccataacgaccctgacgcggctttccggctg
gtgtcttcccatttgcggctggtggtgcgcatcgccatggacttccagcgccgctggatg
cagaacgtgctggatctggtgcaggagggcaacgtgggcctgatgcgcgcggtgaacaaa
tttgatcccgacaagggcatcaagttctcctactacgcctcgttctggatcaaggcctac
atcctcaagtttatcatggacaactggcggatggtcaagatcggcaccacccaggtgcag
cgcaagctgttctataatctgaaccgcgagcgccagaagctgatcgcccagggctacgat
cccgacgcggccatgttgtccgaacgcctgggcgtgaccgaggaccagatcaatgagatg
gaccagcgcctggcctccacggacctctcgctcaacgtccaggtgggcgaggattccggc
ggggccagccgcatggactttctgcccgccttgggccccggcattgaggacaccctggcc
tcggacgagatcgcgggcctggtgcgctcgcgcctgaaaaccatcatgcccaagctcaat
gaaaaggaagtgtatatcctgcagaaccgtctgctcaccgacgaacccgtcaccttgcgc
gagataggcgaacggtataacgttacgcgcgaacgcgtccgccagcttgaggcccggctt
ctggaaaaaatccgccaacacctcaccctggacatcaaggacttttcagacgcatggata
caatcataa
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