Desulfovibrio fairfieldensis: AXF13_05530
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Entry
AXF13_05530 CDS
T04293
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_05530
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AXF13_05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_16
ChlI
DnaB_C
RecA
ABC_tran
AAA_22
AAA_30
Lon_C
NTPase_1
KdpD
ATPase_2
NACHT
TackOD1
AAA_24
nSTAND3
CbiA
DAP3
SLFN-g3_helicase
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
AMD89615
UniProt:
A0A109W413
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All DBs
Position
1311624..1312991
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AA seq
455 aa
AA seq
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MAKTREVYICSVCGAQTLQWRGQCPNCHEWNTLEASAQARPAAGRRPAGLGAAAGVRADR
PVPLRDVADAGHTPYGSGLKALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGLVAAQ
GKAVLYASGEESLPQIKARGERLRMLDPNLLALATSKVEDVLDALNGVGGSRPPALVIVD
SVQTVTSLEAEGLPGNVSQVRAVATALLEACRRVGCTLILVGHVTKDGVLAGPRLLEHMV
DTVISLEGDRRQMFRLLRVFKNRFGPNEELLVFRMGERGMQVVDDPSTFFLGARDASLSG
TAVVMAVDGQRPLAVEVQALVARTFLSIPRRAALGFDANRLHLLLAVLEKRLKLNFGQVD
IYAKVGGGMRLQEPGLDLALVAAVLSSYYDVPLPEKCVLWGEVDLNGQVRPVAAQELRLS
QARRLGFEPIVYPDGGQGGGIATIAALQQRLFHRQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacgcgtgaagtctatatctgttcggtgtgcggggcccagaccctgcaatgg
cgcggtcagtgccccaactgtcacgagtggaacacccttgaggcctcggcccaggcccgc
ccggcggcgggccgtcggcccgccggtctgggcgccgccgcgggcgttcgggccgaccgg
cctgtccccctgcgcgacgtggccgatgccgggcatacgccctacggcagcgggctcaag
gccctggaccgcgtgctgggcaagggcttggtgccgggcgcggccattctggtaggcggc
gagccgggcatcggcaaatccaccctgctcttgcaggtggccggactggtggcggcccag
ggcaaagcggtgctctacgccagcggcgaggaatctctaccgcagatcaaggccaggggc
gagcggctccggatgctggaccccaatcttctggctctggccacctccaaggttgaggac
gtgctggacgccctcaacggcgtcggcggttccagacccccggccctggtgatcgtggac
tcggtacagaccgtgaccagtctggaggccgaaggcctgccgggcaatgtcagccaggtg
cgcgccgtggccacggccttgctggaggcctgccgccgcgtgggctgcaccctgatcctg
gtgggccatgtgaccaaggacggcgtcctggccgggccccgcctgctggaacacatggtg
gacacggtcatctccctggagggggaccgccgccagatgttccgtctgttgcgcgtgttc
aagaaccgtttcggccccaatgaggaattgctggtctttcgcatgggcgagcgcggcatg
caggtggtggacgacccctccactttttttctgggcgcgcgcgacgcctccctgtccggc
acggccgtggtcatggccgtggacggacagcgccccctggccgtggaagtccaggctctg
gtggcgcgcacttttctgagcattccacgccgcgccgcgctgggctttgacgccaaccgc
ctgcatctgctcctggccgtgctggagaaacggctcaaacttaatttcggccaagtggat
atttacgccaaggtgggcggcggcatgcgcctgcaggaacccggcctggaccttgctctg
gtggccgccgtgctgtcctcctattatgatgtgcccctgccggaaaaatgcgtgctctgg
ggcgaagtggacctcaacggccaggtgcggcccgtggccgcgcaggaattgcgcctttcc
caggcccggcggctgggtttcgagcctatcgtctatccggacggcggccagggcggcggc
atcgccaccatcgcggccttgcagcagcgcctgttccatcgtcaatga
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