Desulfovibrio fairfieldensis: AXF13_05780
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Entry
AXF13_05780 CDS
T04293
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AXF13_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_05780
Enzymes [BR:
dfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AXF13_05780
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AXF13_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AMD91516
UniProt:
A0A109W562
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All DBs
Position
1369083..1370573
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AA seq
496 aa
AA seq
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MQDGILTVRALTEQLRRSLEGRFPFVWVRGEVSNLSRPGSGHIYFSLKDQDAQLQCVWFR
GQQRQAEQGQAFDPLTGEVFDTPRPSPLELLRNGLDLLCAGRISVYAPRGQYQLLVELVQ
PTGQGLLAQAFEERKRKLAEAGYFAQERKRPLPWNPQRVALITSPSGAAIHDFLELAQNR
GCGAEIRLFPASVQGEEAAPEIIRALDEINAQGWAQVIVLIRGGGSLEDLWAFNEEAVAE
AVFCSRLPVLAGIGHEVDVTLADLTADLRAATPSHAAQLLWPLRAELRQRLDEAFAALRR
AAASRLEHAELLLRERENALRWFSPARHQARLSEQVTRFSLVLQRAARQWLADKGSARER
LELARRAALTPEKLDVRQAHLALLHAALGAALPHRLSDAEHTLALAGNRLRTASDAWLEN
RSRRLESLESALAANDPSAPLHRGYALVRTAQGGILRSVGQTAPGRDIEVRLADGRLAAV
VRSVSPEEAQSGEEKE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggcatactgacggtccgtgccctcacggaacagttgcgcagaagtctggag
gggcgctttcccttcgtctgggtacgcggcgaggtgagcaatctctctcgccccggttcc
gggcatatttacttcagtctcaaggaccaggatgcccagttgcagtgcgtctggttccgg
gggcagcagcgccaggccgagcaagggcaggcctttgacccgctcaccggcgaggttttt
gatacgccccgcccctcgccgttggaattgttgcgcaacggcctggacctgctctgcgcc
gggcggatcagcgtctatgccccgcgcggccagtaccagctgctggtggaactggtgcag
cccacgggccagggtctgctggcccaggcctttgaggagcgcaagcgcaaactggcggaa
gccgggtacttcgctcaggaacgcaagcgccccctgccctggaacccgcaacgggtggcc
ctgatcacctcgcccagcggcgcggccatccacgattttctggagctggcccagaatcgg
ggctgcggcgcggagatacgccttttccccgcatcggtgcagggcgaggaagccgctccg
gaaatcatccgggccttggacgagatcaatgcccagggctgggcccaggttattgtgctg
atccggggcggcggctcgctggaagatctctgggccttcaatgaagaggccgtggcagaa
gctgttttttgttcacggttgcccgtgctggcgggcatcggccatgaggtggatgtgacc
ctggcggatttgaccgccgacctgcgcgcggccacgccctcccatgcggcgcaactgctc
tggcctttgcgcgcggaactccggcaacgcctggacgaggcgtttgccgctttgcggcgg
gccgctgccagccgccttgaacacgcggaattgttgttgcgggagcgggaaaacgccctg
cgctggttttcgcccgcgcgccatcaggcccgcctgtccgagcaggtgacgcgcttttcc
ctggttttgcagcgcgctgcccggcaatggctcgcggacaagggcagcgcccgggaacgc
ctggaactggcccgcagggccgcgctgaccccggagaagctggatgtgcgccaagcgcat
cttgccttgttgcatgcagccttgggagcggccctgccgcaccgtctgagcgatgcggaa
catacgctggccctggcgggaaatcgtttgcgaacagcgagcgacgcctggctggaaaac
cgctcccgccgtctggaaagcctggaatcggcactggcagccaatgatccgtcggctccg
ttgcatcggggttacgccttggtgcgcacggcacagggcggcatcctgcgttcggtgggg
cagacggctcccggccgggatattgaagtgcgcctggccgacggccgtctggccgccgtg
gtcaggagcgtcagcccggaagaagcgcaatccggtgaggaaaaagaatga
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