Desulfovibrio fairfieldensis: AXF13_06020
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Entry
AXF13_06020 CDS
T04293
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfi03019
]
AXF13_06020
Messenger RNA biogenesis [BR:
dfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AXF13_06020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_16
AAA_33
Herpes_Helicase
SKI
AAA_29
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMD89704
UniProt:
A0A109W426
LinkDB
All DBs
Position
1422063..1423016
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AA seq
317 aa
AA seq
DB search
MSTSQQPPCRSPSDPDSSADTPKVAHDRPVQVCIVTGLSGAGKSTAVQVFEDLRYFAVDG
LPASLAPEMAAMMERPSMSHFMGIALGMDMRQSNFPDEINDALSVMAAKGIRPLLLFLEA
DAQELMRRYATTRRPHPLEREGMGLEAALAAERNRLRPLREMADLVIDTSRFSIHDLRRS
IQKRWSGNKDKLRAIRVNVISFGFKYGVPREADTVFDLRFLPNPYFVEELRPLCGKDKAV
ADYVFASPSAVEFRKKLLDLLFFMLPLMEAEGRYRITIAVGCTGGRHRSVAMAEELSQAL
RQADYPTSLEHRHLELG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtcacagcagcccccctgccgcagtccgtccgatccggattcatctgctgac
acgcccaaagtcgcccatgatcgccctgtgcaggtctgtattgtcaccggtctttccggc
gcgggcaaaagtacggccgtgcaggtttttgaagatctgcgctatttcgccgtggacggt
ctgcccgcaagtctggccccggaaatggccgctatgatggaacgcccttccatgagtcat
ttcatgggcattgccttgggcatggatatgcgtcagagcaatttcccggatgaaatcaac
gacgcattgagcgttatggccgccaagggtatccgtccgcttttgctgtttctggaggct
gacgcgcaggagctcatgcgccgctacgccaccacccgccgcccgcatccgctggagcgg
gagggcatgggccttgaagccgccctggccgccgaacgcaaccgcctgcgccctttgcgg
gaaatggccgacttggttatcgacacttcgcgtttttccatccatgacctgcggcgttcc
attcaaaagcgttggagcggcaacaaggacaaattgcgggctatccgcgtcaatgtgatt
tcctttggcttcaagtacggcgtgccccgagaagccgacacggtttttgatctgcgcttt
ctgcccaacccgtattttgtggaagagctgcgtcccctttgcggcaaggacaaggccgtg
gccgattatgttttcgcctcgcccagcgcggtggaattccgcaagaaactgctggacctg
ctttttttcatgttgcccctgatggaggccgaaggccgctaccggattaccatcgccgtg
ggctgcaccggcgggcggcaccgctcggtggccatggccgaagaattgtcacaggcgctt
cgccaggcggactacccgacctctctggagcaccggcaccttgaacttggctga
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