Desulfovibrio fairfieldensis: AXF13_06390
Help
Entry
AXF13_06390 CDS
T04293
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AXF13_06390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_06390
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AXF13_06390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMD89768
UniProt:
A0A0X8JJ53
LinkDB
All DBs
Position
1503412..1506153
Genome browser
AA seq
913 aa
AA seq
DB search
MPETPTKLTPMFEQYMHIKADYPDALLFYRMGDFYELFFDDAVTAARELQIALTSRSKDS
ENPVPMCGVPWHAVQSYVAQLIDKGFHVAICDQTEDPKAAKGLVKRAVTCVITPGTVLED
ANLNTKSHNYLGALCYDTGQGRGGFAWADISTGQWSGVEFKRQAELWQWAQKLAPRELLV
PEGLELPPHCLLEGVRMVRMPAAHFDLKRATERTLRAQGVQEAGALGLQGKNELMRSCGA
LLVYLDQTQKRDPDHLMPFKPLDLSRRLLIDEVTERNLEIFTRLNGRKGKGTLRHVLDDT
MTPMGGRFLEDMLRHPWRETGPIARIQEAVAFFHDDDNRRAALREALREVYDLERLSTRI
SLNRGGPRDFIALRNSLAALPKVHNALITSTDGSYATEAQSLGHELPQSLYQIVKTWDHL
EDCTTLLSAALVDSPPTVITDGGLFKSGYNAELDKLLDLVEHGEQKLQELLEEEQKKTGI
AKLKMGYNRVFGYYYEVTRASHSGPMPEHFIRRQTLANAERFTTVQLKELEEELLSAADK
RKSLEYKMFQDLREHMARQRERIVHMADLVAQLDYWQSLAQVGRQNNWCRPRLTDSAHLD
IREGRHPVVEGMLGSANFVPNNFRLDQKRRLCLLTGPNMAGKSTVLRQVAIICLLAQMGS
MVPAAEATLGLVDRLFSRVGASDNLAQGQSTFMVEMMETARILRQATRRSLVILDEIGRG
TSTYDGVALAWAVVEDLARRAGGELRTLFATHYHELTALEGRIPGVFTMNIAIREYNNDI
LFLHKLVPGPSDRSYGVEVARLAGVPVPVVQRARTILAGLERGREGSRKAVSVASMSLPG
LDLPKAKTEADADLPEINAAPPAAEHPLVRLLYDLTPETLSPLDALKLLMEWKSLWGTEP
DTDANDGDQNEEA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaactcccaccaaactgacgcccatgttcgaacaatatatgcacatcaaggct
gactaccctgatgctttgcttttttatcgtatgggcgatttttatgaattgtttttcgat
gatgccgtgactgcggcgcgcgaattacagatcgcactgaccagccgcagcaaggacagc
gaaaatcctgtgcccatgtgcggcgtcccctggcatgccgtgcagagctatgtagcccag
cttatcgataagggcttccacgtagccatctgcgaccagaccgaagaccccaaggccgcc
aagggcctggtcaaacgggccgtcacctgcgtgatcacgccgggcacggttctggaagac
gccaatctgaacaccaaaagccacaactatctgggcgcgctttgctacgatacgggccaa
ggccggggtggtttcgcctgggcggacatttccaccgggcagtggtcaggcgtggagttc
aaacgtcaggcagagctctggcaatgggctcagaagctggcgccgcgcgaacttctggtg
ccggaagggctggaactgccgccccactgcctgctggaaggtgtgcgcatggtgcgcatg
cccgccgcgcattttgacctcaaacgcgccacggagcgcaccctcagggcacagggcgta
caggaagccggagcgctgggtctgcaaggcaaaaacgaactgatgcgttcctgcggcgcg
ctcttggtttatctggatcaaacccagaagcgcgatccagatcatctcatgccgtttaaa
ccgctggacctgagccgtcgcctgctgatcgacgaagtgaccgagcgcaacctggaaatc
tttacccgcctcaacggccgcaagggcaagggcacgttacgccacgtactggacgatacc
atgacgcccatgggcggccgctttctggaagacatgctccgccatccctggcgggagacc
ggacccatcgcgcgcattcaggaagccgtggcctttttccatgacgacgacaaccgccgc
gccgcattgcgggaagccctgcgcgaagtctacgatctggagcgcctttccacccggatc
agtctcaatcgcggcggcccgcgtgatttcattgccctgcgcaacagcctcgccgccctg
cccaaggtccataacgccctgatcacaagcacggacggcagttatgccacggaggcccag
tctctggggcacgaattgccgcaaagcctttaccagatagtcaaaacctgggaccatctg
gaggactgcacaaccctgctgagtgcggccctggtggacagcccccccaccgtgattacc
gacggcggtttgttcaaaagcggttataatgccgagttggacaaactgctggatcttgtg
gagcatggcgaacaaaaacttcaagagttacttgaagaagagcagaaaaaaaccggcatc
gccaagttaaaaatgggctataaccgtgtattcggttattattacgaagtaacgcgggct
tcccattcgggcccaatgccggaacatttcatccgccgccagaccctggccaatgcggaa
cgcttcaccaccgtgcaactcaaggaactggaagaagagctgctttccgccgcggacaag
cgtaagagtctggaatacaaaatgttccaggatctgcgggagcatatggctcgtcagcgc
gagcgtatcgtgcacatggcggatctggtggcccagctggattactggcaaagccttgcc
caggtgggacggcagaacaactggtgccgtccccggctcacggacagcgcgcatctggac
atccgcgaaggtcgccatccggtggtggaaggcatgctgggcagcgccaactttgtgccc
aataatttccgtctggaccagaagcgccgcctctgcctgttgaccggccccaatatggcg
ggcaagtccacggtgctgcggcaggttgccattatttgcctgctggcccagatgggttcc
atggtcccggcggccgaggccacgctggggctggtggaccgtctcttttcccgcgtgggc
gcttcggataatctggcccagggtcagagcacattcatggtcgagatgatggaaaccgcg
cgcattctgcgccaggccacccggcgcagcctggtcattctggacgaaatcgggcgcggc
accagcacctatgacggcgtggccctggcctgggccgttgtggaggatctggccaggcgc
gccggcggcgaactgcgcacgcttttcgccacgcactaccatgagctcacggcgctggag
ggacgcattcccggcgttttcaccatgaatatcgccattcgcgagtacaacaacgacatt
ctgttcctgcataagctggtgcccggcccgtcggaccgcagttacggcgtggaggtggcg
cgtttggcgggcgtgcccgtccccgtggtgcagcgggccaggaccatcctggccggtctg
gagcggggccgcgaaggctcgcgtaaagccgtgtccgtggcgtccatgtccctgcccggc
ctggatctgcctaaagcgaaaacggaagctgacgccgatctgccggagatcaatgccgcg
ccgcccgcagcggaacatcctctggtgcgcttgttgtacgatctcacgccggagacgctc
agcccgctggacgcgctcaaacttctgatggaatggaaaagcctctggggcacggagccg
gatacggatgccaatgacggcgatcagaacgaggaagcatga
DBGET
integrated database retrieval system
