Desulfovibrio fairfieldensis: AXF13_07680
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Entry
AXF13_07680 CDS
T04293
Name
(GenBank) DNA polymerase I
Organism
dfi
Desulfovibrio fairfieldensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH
HHH_5
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AMD90006
UniProt:
A0A109W4A0
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Position
complement(1799913..1802681)
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AA seq
922 aa
AA seq
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MSLKERLGLASDPIFLMDGSAFIYRGFFANKNMQRSDGFPTNALVVVTRVLLRILREERP
RHFVFVKDGKGKNFRHDIFPLYKANRDAMPEDLARQIEPILRMVHALGLKLEVSEGCEAD
DCIASLAARFSSERPVVIVSGDKDLKQCLGPNVYMWDPAAREEKLLNEAEFRAESGVSPA
QWPDVQALVGDASDNIPGVPGIGPKTARQIFEICPSLEDIRDHFVLLPPKIQDKMRGHLE
DMFIWRELTTLSLKACESLTLDDMAVRPLNVPECRALAEEFELFALRREMASLLRRQSDE
DAAAPPRPGARTEDAASGAEGAAAQKAGAQSVSFAAASSGGVSRSQTRTGAQMSLLDAVE
EPLAPELSDVAALPDCAGRHVALIWPQGPKQPPHLAVGDPLSETTEPAEYCWTGRMDMLC
AWLQSARRLVVADLKALLTAAPCWRNLPLGETPPRCFDLGLAAYLLNPEESDYGWPRLAA
RWGAALKPEGGGPARLALAMAEALEDRLVRDGLRELYNTLELPLTPVLAEMEGRGVAIDA
AAFQAFLSDVQHELDRLTAEVYAAAGTTFNIRSAQQLGDVLFKTLNLPSPRKTKGGQAST
SQQTLEKLAGRHAVVDSILQFRKLEKMRSTYLDPLPRLVDGQGRIHTTFNQKATATGRLS
SSNPNLQNIPVRGPLGKRMRACFIAGPGRTLVSADYSQVELRVLAHMSQDAALLDAFRQG
EDIHARTAALIYDLQAGEVSPDQRRNAKTINFGLIYGMGAQKLGQELKISTAEAKEFITR
YFERLTGLKAFYENVEATAKRQGYVTTLGGRRRLLPDILSANGQAFALARRQAINTVIQG
SAADIIKLAMLAVAHDAELRRMDARLLLQVHDELLLETPEATAEAAGARVAALMSSVAPG
GETLSVPLVVDWGVGHDWGTAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaaagaacgcctgggcctagcctctgatcccatatttctgatggacggttcc
gccttcatttatcgcggctttttcgccaataaaaatatgcagcgctccgacggttttccc
accaacgccctggtggtggtgacccgcgtgctgctgcgcatcctgcgcgaggagcggccc
cggcatttcgtcttcgtcaaagacggcaagggcaaaaattttcgccacgatatctttccg
ctgtacaaggccaaccgcgacgccatgcccgaggatctggcccggcagatcgagcccatc
ctgcgcatggtgcatgccctgggcctcaagctggaagtctcggagggctgcgaggccgat
gactgcatcgcctccctggcggcccgtttttcttccgagcgcccggtggtcatcgtcagc
ggcgacaaggatctgaaacaatgcctggggcccaacgtctatatgtgggatccggcggcg
cgcgaggaaaaacttctcaacgaagccgaattccgggccgagagcggggtgagcccggcc
cagtggcccgacgtgcaggccctggtgggcgacgccagcgacaatatccccggcgtgccg
ggcatcggccccaagaccgcgcgccagattttcgagatctgtcccagcctggaggacatc
cgggatcatttcgtcctgctgccgcccaaaatccaggacaagatgcgcggccatctggag
gatatgttcatctggcgggagctgaccaccttgtcgctcaaggcctgcgaaagcctgacc
ctggacgacatggccgtgcggccgctgaatgtgccggaatgccgggctctggccgaggaa
ttcgaactctttgccctgcgccgggaaatggcatcgctgctgcgccgccagagcgatgag
gatgcggccgcgccgccgcgtccgggcgcgcggacagaggatgccgcgtccggagccgag
ggggccgccgcgcagaaagccggtgcgcaaagcgtttcgttcgctgcggcgtcatccggc
ggcgtctcgcggtcccagacccgcacgggcgcgcagatgagcctgctggatgccgttgaa
gaacctctggccccggaactctcggatgtcgccgccctgccggactgcgcgggccgccat
gtggccctgatctggccgcagggtcccaagcagccgccgcatctggccgtgggcgatccg
ctgtccgagacgacggagcctgcggaatactgctggaccgggcgcatggacatgctctgc
gcctggctgcagtcggcccggcggctggtggtggccgatctcaaggccctgctgaccgcc
gcgccctgttggcgcaatctgcctctgggcgaaacgccgccgcgctgtttcgacctgggc
ttggccgcctatctgctcaatcccgaggaaagcgattacggctggccccgcttggccgcg
cgctggggggcggctctgaaacccgagggcgggggtccggcccggctggctctggccatg
gccgaagccctggaggatcgtttggtccgcgacgggctgcgcgagctttacaatacgctg
gaactgcctcttaccccggtgctggccgaaatggaagggcgcggcgtggctatcgacgcc
gccgcgttccaggcctttctctccgacgtacagcacgagctggaccgcctcaccgccgag
gtctacgcggcggcgggaacgaccttcaacatccgttcggcccagcagctgggcgatgtg
ctcttcaagaccctgaatctgccctcgccgcgcaaaaccaagggcgggcaggcttccacc
agccagcagactttggaaaaactggccggacgccacgctgtggtggacagcattctgcaa
ttccgcaaactggagaagatgcgctccacctatctggacccgctgccgcgcctggtggac
gggcaggggcgcatccataccaccttcaatcagaaggccacggccaccgggcggctgtct
tccagtaatcccaacttgcagaatattcccgtgcgcggcccgctgggtaagcgcatgcgg
gcctgcttcatcgccgggccgggccgtaccctggtttccgccgactattcccaggtggaa
ctgcgcgtgctggcccatatgtcccaggacgcggccctgctggacgccttccgccagggc
gaggacattcacgcccgcaccgcggccctgatctatgacctgcaggccggtgaggtcagc
ccggaccagcgccgcaatgccaagaccatcaatttcggcctgatctacggcatgggcgcg
caaaagctgggccaggaactcaagatcagcaccgccgaggccaaggaatttattacccgc
tattttgaacggctcacgggcctcaaggctttttacgagaacgtggaggccacggccaaa
cgccagggctacgtgaccaccctgggcggccgccgccgtctgttgcccgacattctttcg
gccaacggccaggcctttgccctggcccggcggcaggccattaatacggtcatccagggc
tcggccgcggacatcatcaagctggccatgctggccgtggcccatgacgcggaactgcgg
cgcatggacgcccgccttctcttgcaggtgcatgacgaactgttgctggaaacgcccgaa
gccacggccgaagcggccggtgcgcgggtggccgccctgatgagctcggtggctccgggc
ggcgagacgctttccgtgcctctggtggtggattggggggtggggcatgattggggcacc
gcccactag
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