Desulfovibrio fairfieldensis: AXF13_07885
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Entry
AXF13_07885 CDS
T04293
Name
(GenBank) TonB-dependent receptor
Organism
dfi
Desulfovibrio fairfieldensis
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMD90043
UniProt:
A0A0X8JKG8
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Position
1844524..1846497
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AA seq
657 aa
AA seq
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MNPVVVTATRTKHSLGDVSAAVSVVTRKELDRIPAQNVLDVLRTMSGVTVDSDRSVFGSS
TYNKVIIRGMGGNTQGRVLVLVDGMPAMPAGTNIFEWNSINLDAVERIEVVRGPSSALYG
SSAMGGVINIITRTPPKEGFTATLDTKYGSYNTWDSSLYHAGAVGKFNYSLSGSYLTSYG
FNGIPEHSSKAASNQKPGYNDDGTGVRNVTGAARVGYRFDDTADITVNADLASNLRTGQY
NFDDDYRLYEYHKTGFGLRLHKDFGVVDSSLALRADFLHTDYDSIVGTRVDYTSPTRQEQ
YNLDQQNTFAWGEHQQITMGVAASYGRSDQDLDYSHLSTYKDRIREKGGSQYTLAGYIQD
EISLFGNTVQIIPGLRYDIIGTDGYDKDSTSKVRNWRKEYGVEVDNRLTPKLGLRVNPWD
GLLVFRANYGEAFRSASLDERFGEYVYGSTLYKGSPDLKPELSRTLDAGFDFSPLKELTF
GVTGYITWAEDYIASIKDDTKTGDYFISQKQNIDSVQITGLEGEASWKATEYFTLFANGT
ILNPQITSGQYKGNQIPFTPTSKATVGFTFAHPDWFTLRVGATWTGPIWTDQANMEANQE
GNFWLGEVRISKRFDLQDWWVEPYAELLAATTKEEVRYTNTSRIPTNMAFVGIKAGF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgttgtcgtcaccgctaccagaaccaaacacagccttggtgacgtctccgca
gcggtatcggtcgttacccgcaaggaacttgaccggatcccggcccagaacgtactggac
gtcctgcggaccatgtcgggcgtcactgtggacagcgaccgcagcgttttcggcagcagc
acctataataaggtcatcattcgcggcatgggcggcaacacccagggacgggtgctggta
ctggtggacggcatgcctgccatgcctgcgggaacaaacattttcgagtggaacagcatc
aacctggatgccgtggagcgcattgaagtggtgcgcgggccgtcgtctgcgctttacggc
tccagcgccatgggcggcgttatcaacatcatcacccgcaccccgcccaaggagggcttc
accgccaccctggacaccaagtacggcagttataacacttgggattccagcctgtatcat
gccggagcggtggggaaattcaattattccctttccggcagctatctgacctcctacggc
ttcaacggcatcccggagcacagctccaaggccgccagcaatcagaagcccggctataat
gacgacggcaccggcgtgcgcaacgtcacgggcgcggcgcgtgtgggttatcgctttgac
gacacggccgacatcacggtcaatgccgatctggcctccaatctgcgcaccgggcaatac
aatttcgacgatgactaccgcctgtacgagtaccacaaaacaggtttcggcctgcgcctg
cacaaggacttcggcgtagtggacagttccctggctctccgcgcggactttctgcacacg
gattacgacagtatagtaggcacacgtgtggactatacttcgcctaccaggcaggaacag
tacaatcttgaccagcagaataccttcgcctggggagaacaccagcagatcaccatgggc
gttgccgcctcatacggacgctcggatcaggatctggattattcccatctctccacctac
aaagaccgcatccgtgaaaaaggaggcagccagtataccctggccggttacattcaggat
gaaatcagtctgttcggcaacactgtgcagatcattcccggcctgcgctacgacatcatc
ggcacggacggctatgacaaggattccaccagcaaggtacgcaattggcgcaaagagtac
ggcgttgaagtggacaaccgtctcactcccaaactgggcctccgcgtgaatccctgggac
ggcctgcttgttttccgcgccaattacggcgaggccttccgctccgccagcctggacgaa
cgcttcggcgaatatgtttacggcagcaccttgtataaaggcagccccgacctcaagccc
gaactctcgcgcaccctggatgcgggttttgatttttcgccgctcaaggaactgaccttt
ggcgtcacaggctacatcacctgggccgaggattatatcgcctccatcaaggacgacaca
aagacaggtgattacttcatttcacaaaagcaaaacatcgacagcgtacagatcaccggt
ctggaaggcgaggccagttggaaggccacggagtatttcaccctgtttgccaacggcacc
attctgaacccgcagatcacttccggacaatacaagggcaaccagattcccttcaccccc
acttccaaggccaccgtgggatttactttcgctcacccggactggttcaccctgcgtgtg
ggcgccacctggaccggtcccatctggacggatcaggccaatatggaggccaatcaggaa
ggcaatttctggctgggcgaagtgcgcatttcaaaacgctttgacctccaggactggtgg
gtggaaccctacgcggaactgctagccgctaccaccaaggaagaggtgcgttatacaaat
acgtcccgcattcccaccaacatggcctttgtgggtataaaagcaggattttaa
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