Desulfovibrio fairfieldensis: AXF13_09460
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Entry
AXF13_09460 CDS
T04293
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_09460
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AXF13_09460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
ResIII
AAA_16
AAA_30
TrwB_AAD_bind
SLFN-g3_helicase
FtsK_SpoIIIE
AAA_19
T2SSE
CbiA
AAA
AAA_7
AAA_25
AAA_28
nSTAND3
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AMD90326
UniProt:
A0A0X8JKF4
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Position
complement(2220455..2222002)
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AA seq
515 aa
AA seq
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MLDNDHQALMARAGERDTCILPAMGNRHGLITGATGTGKTVTLQSLAETFSALGVPVFLA
DVKGDLSGLAKAGAPTGKVAERIARLGLAARGYLNQAFPVCFWDVFGKSGHPLRATVSEM
GPLLLSRLLNLNEVQSGVLHLVFRIADDAGLLLLDMKDLRSMVQHVGDARDQYRTAYGQI
STASVGAIQRGLLRMEEEGGDRFFGEPALDIMDLLQTDSQGRGVVNILAADALMNAPRLY
SSVLLWLLSELFERLPEVGDTDKPRLVFFFDEAHLLFDGAPPVLLQKIEQVTRLIRSRGV
GVYFVSQNPADMPDSVLGQLGNRVQHALRAFTPGEQKAVRAAARAFRPNPAFNTEDVIGQ
LAVGEALVSFLDADGAPRIVERALIVPPQSQVGPITPEERAVVMRNSLVAGAYERAVDRE
SAYEILTARAARRQEAADDEARRKAEALAEKERLRQEAAVRREETRARRSGGGDGLGDIL
GSVAKQTTRTIGTTVGREIGRTVVRGLLGGLFGKR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacaatgaccatcaggcgctcatggcccgcgccggggaaagggatacctgcatc
ctgcccgccatgggcaatcgccacggcttgatcaccggggccacgggcacgggcaagacc
gtgaccctgcaaagcctggccgaaaccttcagcgccctgggcgtgccggtctttctggcc
gacgtcaagggcgacctttcgggtctggccaaggcaggcgcgcccacgggaaaagtggcc
gagcgcattgcccgactgggccttgcggcgcgcggttatctcaatcaggcgttcccggtc
tgcttctgggatgtgttcggcaaaagcggccaccctctgcgcgccacggtgagcgaaatg
gggcccttgctgctctcccgcctgctcaacctcaacgaggtgcagagcggggtgctccat
ctggtcttccgcattgccgacgacgcgggtctgctgcttctggacatgaaggatctgcgc
agcatggtgcagcatgtgggcgatgcgcgcgatcaatacaggacagcctacgggcagatt
tccacggccagcgtgggtgccatccagcgcggcctgctgcgtatggaggaagagggtggg
gaccgctttttcggtgaaccggccctggacatcatggatctgctccagactgatagtcag
ggccggggcgtggtcaacatcctggccgccgacgcgctgatgaacgcgccgcgtctttat
tccagcgtattgctctggctgttgtccgagctgtttgaacgtctgcccgaagtgggcgat
actgacaagccgcgtctggtcttctttttcgacgaggcccatttgctctttgacggagcg
ccgcccgtgctgctgcaaaagatcgagcaggtgacgcgtttgattcgctcgcgcggggtg
ggggtctattttgtgagccagaacccggcggacatgccggacagcgtgctgggccagctc
ggcaatcgcgtgcagcacgccctgcgggcctttacccccggagaacagaaggccgtgcgc
gccgcggcccgggctttccggcccaatccggctttcaataccgaggatgtcatcggccag
ctggccgtgggcgaggctctggtgtcttttctggacgccgacggcgcgccccggatagtg
gagcgggcgctgatcgtgccgccgcagagccaggtggggcccatcacgcccgaagagcgc
gctgtggtcatgcggaattcgctggtggcgggagcgtacgagcgggccgtggaccgcgag
tcggcctatgaaatcctgaccgcgcgcgccgcccgccgacaggaggccgcagacgatgag
gcccggcgcaaggccgaagctctggctgaaaaggaacgcctgcggcaggaggctgcggtc
cggcgcgaagagacgcgcgcccggagaagcggcggcggtgacggcttgggagatattctg
ggctcagtagccaaacagacgacccgtaccatcggcaccaccgtgggtcgggagatcggg
cgcacggtggtccggggattgctgggcggcctgttcggcaagcgctga
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