Desulfovibrio fairfieldensis: AXF13_09515
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Entry
AXF13_09515 CDS
T04293
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXF13_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_09515
Enzymes [BR:
dfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXF13_09515
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXF13_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_PriA
PriA_C
DEAD
Helicase_C
ResIII
PriA_3primeBD
AAA_30
Trm112p
SRP54
AAA_16
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AMD90336
UniProt:
A0A109W4F6
LinkDB
All DBs
Position
complement(2236234..2238603)
Genome browser
AA seq
789 aa
AA seq
DB search
MYASVALLSPPYACLTYALPPEFPAAFWQTGLRLAVPLGRGEQGALRAAVLLRVSPTTDL
PENVACKTVCWPLENEALLPPDLLALALDLARRQGVEPGHILGHVLPQGLRSTRVRLHRL
EAGRASALSLRQIREIQPEERRELAQALCVGAARMLAPGADAASEEFCLLRADPPWPVRP
SAARQIEVLEYLHEHGAVSRRRLLQNLGQAVAPALQSLLKAGHLALTREDSGEEDEQALL
PPPPTPFCLNADQEAALAGLRAALGEEEPASRLLYGVTGSGKTAVYLELAKMCLAQGKSL
LLLAPEVALAHKLRRDAACSLPDAPLFFYHGYQSPARREATFRALAARREPCLVVGTRSA
LFLPVPRLGCVVLDEEHDGSFKQDESLSYQAKEVAWFRMAQTRGLLLLGSATPDVKTFYA
AENGHLPLLRLPSRVGGKPLPPVELIDISTVSPVVSAMDGDGLLAPQSEAALRETLDRGE
QAVVLLNRRGYAPLMYCLDCNSTLRCPQCEIGLTYHKGREKLVCHYCGYTRPFPSPCPQC
KGMNFLPLGEGTERLAERLSVLAGRPVLRLDRDSTRRPGRMEEILAAFARQEAPILVGTQ
MLSKGHHFPQVTLVVVADGDLGLNLPDYRAAERTFQLLVQSAGRAGRGEKPGRVLIQTRD
VSHYCWQYVQTGDYEGFYAAELARRRLRRYPPFVRLALIRMSFGVEEKNGPAALNELATA
LRARARELDVQMLGPAPAPLALLRGRRRFHCLLKAGDWQALRRLYFFARSRKASALLRLF
LDLDPVNML
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccagcgtcgccctgttaagccctccctatgcctgcctgacctatgcgctgccg
ccggaattcccggcggcattctggcaaaccggtctgcgtctggccgtgcccctgggcagg
ggagagcagggggctctgcgggcggcggtcttgttgcgcgtgagccccacaacggatctg
ccggaaaatgtggcttgcaagacggtctgctggcctctggaaaatgaagccctgctgccg
ccggacctgctggctttggcgctggacctggcccgccgccagggcgtggagccggggcat
atcctgggccatgtgctgccgcagggactgcgcagcacgcgcgtccgcctgcaccgcctg
gaagcgggccgcgcctcggcgctgagcctgcggcagatccgcgagattcagccggaagaa
cgccgtgaactggcccaagcgctctgtgtgggcgcggcccgtatgctggctcccggcgcg
gacgcggccagcgaagaattttgcctcttgcgcgcggacccgccctggccggtgcgcccc
tcggcggcgcggcagattgaagttctggaatatctgcatgaacacggggccgtgagccgc
cgccgtttgctgcaaaacctgggacaggctgtggctccggctctgcaaagcctgctcaag
gccggacatctggcgctgacgcgcgaggacagtggggaagaagatgagcaggccctgctg
ccgcccccgccgacgcctttctgcctcaatgcggaccaggaagcggccctggccggtctg
cgcgcggctctgggcgaggaggagccagcctcccgcctgctctacggcgttacgggcagc
ggcaagaccgccgtgtacctggaactggcaaaaatgtgcctggctcaggggaaaagcctc
ttgctgctggctccggaagtggcgctggcccataagttgcgccgtgacgcggcctgttcc
ctgccggacgcgccgctctttttttaccacggttatcagtctccggcccggcgtgaggcc
accttccgcgctctggccgcccggcgtgaaccctgtctggtggtgggcacgcgctcggct
ctttttctgcccgtgccccggctgggctgcgtggtgctggatgaagagcacgacggctcc
ttcaaacaggatgaaagcctttcctaccaagccaaggaagtggcctggttccgcatggcc
cagacgcgcggtctgctgctgctgggctcggccacgccggacgttaaaaccttttacgcg
gcggaaaatggccatctgcccctcctgcgtctgccgagccgggtgggcggcaagcctttg
ccgccggtggaactgatcgatatcagcacggtgtccccggtcgtctccgcgatggacggg
gacggcctgctggccccgcagagtgaagcggccctgcgcgaaaccctggacaggggcgag
caggccgtggtcctgcttaaccggcgcggctacgcgcctctgatgtactgtctggactgc
aacagcaccctgcgctgcccgcagtgcgagatcgggctcacctaccataaggggcgggaa
aagctggtttgccactattgcggctatacccggccctttccttcgccctgcccgcagtgc
aagggcatgaactttctgcccctgggcgagggcaccgagcgcctggccgagcgtctgagc
gtgctggccgggcggcccgtgctgcgtctggaccgcgacagcactcgccgtccgggccgc
atggaggaaatcctggccgcctttgcccggcaggaagcgcccatcctggtgggcacgcaa
atgctctccaaaggtcatcatttcccgcaggtgaccctggtcgtggtggccgacggcgat
ctgggcctgaatctgcccgactaccgcgcggccgagcgtacctttcagctcctggtccag
tccgcgggccgggccgggcggggcgaaaagccgggccgggtgctgatccagacccgggac
gtcagccattattgctggcagtacgtgcaaacgggcgattatgagggcttttacgcggcg
gaactggcgcggcgccgcctgcggcgctatccgccctttgtgcgcctggctttgatccgc
atgtccttcggcgtggaggaaaaaaacgggcccgcggccctgaacgaactggccaccgcc
ctgcgcgctcgggcgcgtgaactcgacgtccagatgctgggccccgcgcccgctcccttg
gccctgttgcgggggcggcggcgttttcactgcctgctcaaggccggggactggcaggcc
ctgcgtcgactctattttttcgccagaagccggaaagcctccgcgctgttgcgacttttc
cttgaccttgatcctgttaatatgctgtga
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