Desulfovibrio fairfieldensis: AXF13_09590
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Entry
AXF13_09590 CDS
T04293
Name
(GenBank) diguanylate phosphodiesterase
Organism
dfi
Desulfovibrio fairfieldensis
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Gene cluster
GFIT
Motif
Pfam:
EAL
SBP_bac_3
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AMD90350
UniProt:
A0A120KM56
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Position
2258794..2261685
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AA seq
963 aa
AA seq
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MTSPFSRILSVLLTICFLSAPLSLRAMEGTETARVGYYEDGDYMRRTHSGEYVGFNFEYL
QEISKFSGLTYQVVDGVSWEHTLEMLEKGEIDILPAVYYTPERAKKMLFSELPMLSLYTT
LNVRADDGRYSYEDFPSFRGMKVGIIANSKDGEKFRQYCRDNGLDLIIVPYAETAGLLDA
LADKTLDGVAITHLGRNSIFRSVAQFSPEPMYIAVAKDRPDLLARINKAMNIIDLRDPYY
AMRLHAKYFSVSTEQKPVFTEQEEAFIAKKKIIKASYDPSWAPLEYTDPATGRFIGVVAD
LFKHIESESGLLFDFIPLPQLKGLEMAAKGEIDVVCVMAGDYLWNKHYNLNTTGEYLSSP
ALLVRPRQGGEIKTIALQQGYWLSKSIAEENPGKKILYYDSVKECFDALLEGKADVTYAN
AHIVNYLRAEPRYAALNATPLGRYTSQLRIGVSRHADPRLFAILDKCVQYTSMEEMDDLV
LKNTIKPRSIRLRDFVAEHPAEVISGIVAVFGLIILLLAYSLAMKSRHNVQIQSLLYRDR
LTGLDNIDKFYVECNQLLAGSKNEYALLYGDISQFKIVNDNFGFAVGDELLRAYAAILRD
SVGQGERCARVSADHFILLLRYQGWEQLLARTKDMAQSLDVWRYAQGLPYKIGTAFGAYL
VNKTEKHNIHLMLDLANYARRNAKLTMRGPLVLYDEKMRQDALLQQELSGHLENALEQGE
LTAWFQPKVDMPSGEIIGSEALVRWNHPARGLLMPGRFMPLFERNGAVVQIDIYVFEQVC
KALSQWNKQGLPVHPVSCNFSSLHFDRADFPRQLADIAARYEVPHALLEVEITESSIMSN
PESACAQIMQLKERGFLIAIDDFGSGYSSLGQIQQIMADVLKLDRSFVQRNILGAREQIV
LSNVIRMATELGMSVICEGVETGEQADILIQLGCRNAQGFFYAKPMPRRDFEQLLQKGAR
LPV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcccttttcgcgcattctgagcgtgcttctgaccatctgttttctgtcggct
cctctctccttgcgcgccatggaaggcacggaaacggcccgcgtcggctattacgaagac
ggcgactatatgcgccgcactcacagcggcgagtatgtcggcttcaattttgaatatctg
caggagatttccaaattcagcggcctgacctaccaggtggtggacggcgtgagttgggaa
cataccctggagatgctcgaaaaaggcgaaatcgacatcttgcccgccgtgtactacacg
ccggaacgggccaagaagatgcttttttccgagctgcccatgctgagcctgtacaccacg
ctcaacgtccgggcggacgacgggcgttactcctatgaggactttccctccttccggggc
atgaaggtgggcatcatcgccaacagcaaggacggcgaaaaattccgccagtactgccgg
gacaacggcctggacctgatcattgttccctatgcggaaaccgccggcctgcttgacgcg
ctggcggacaaaaccctggacggcgtggccatcacccacctgggccgcaacagcattttc
cgcagcgtggcccagttttcgccggagcccatgtatattgccgtggccaaggaccggccg
gatctgctggcccgcatcaacaaggccatgaacatcatcgacctgcgcgatccctattac
gccatgcgcctgcacgccaagtatttctcggtcagcacggagcagaagcccgtttttacc
gagcaggaagaggcgttcatcgccaagaaaaagattatcaaagcctcgtatgatcccagc
tgggcgcctctggaatatacggatcccgcgacaggccgctttatcggcgtggtggcggac
cttttcaagcatatcgagagcgagagcggcctgctctttgactttataccgctgccccag
ttgaaggggctggaaatggccgccaagggcgagattgatgtggtctgtgtcatggccgga
gactacctctggaataaacactacaacctcaataccaccggcgaatacctgagcagcccg
gcccttctggtccgcccgaggcagggaggagagatcaaaaccattgccctgcagcagggc
tactggctttccaagagcatcgccgaggagaatcccggcaaaaaaattctgtattacgat
tccgtgaaagaatgtttcgatgccctgctggaaggcaaggccgacgtcacctacgccaat
gcccatatcgtcaactacctgcgggccgaaccgcgttacgccgcactgaacgcgacgccc
ctgggcagatacaccagccagttgcgcatcggcgtttcccgccatgccgatccccgtttg
ttcgccattctggacaagtgcgtccagtacacctccatggaagagatggacgacctggtg
ctgaaaaataccatcaagccccgcagcatccgcctgcgtgattttgtggccgagcacccg
gcggaggtcatcagcggcattgtggccgtattcggcctgatcatcctcttgctggcatac
agcctggccatgaaatccaggcacaatgtgcagatccaatccctgctctacagggaccgg
ctgaccggcctggacaatatcgacaagttctatgtggaatgcaaccagctgctggccggt
tccaaaaacgaatacgccctgctctacggcgacatcagccagttcaagatcgtcaacgac
aacttcggttttgccgtgggcgacgaactgctccgcgcctacgcggccattctgcgggac
agcgtcggccagggcgagcgttgcgcgcgcgtttccgccgaccacttcatcctgttgttg
cgctaccaaggctgggaacaactgctggcgcgcaccaaagacatggcccagtccctggac
gtctggcgctatgcccagggccttccctacaaaataggcacggccttcggcgcttatctg
gtgaacaagacggaaaagcacaatatccatctcatgctggatctggccaactacgcccgc
agaaacgccaaactgaccatgcgcggccctctggtgctctatgacgaaaaaatgcgccag
gacgccctgttgcagcaggaattgagcgggcacctggaaaatgccctggaacagggcgaa
ctgacggcatggttccagcccaaggtggacatgcccagcggcgaaatcatcggcagcgag
gcgctggtgcgctggaatcacccggcgcgcggcctgctcatgcctggccgcttcatgccc
ctgttcgagcgcaacggcgcggtggtccagatcgacatctatgttttcgaacaggtctgc
aaggctctgagccagtggaacaagcagggcctgcctgttcacccggtgtcctgcaatttt
tccagcctgcatttcgaccgggcggattttccacggcaactggcggacatcgccgcccgt
tatgaagtgccccacgcgctgctggaagtggaaatcaccgaaagttccatcatgagcaac
ccggaatccgcctgcgcccagatcatgcagttgaaggaacgcggcttcctgattgccatc
gacgactttggttccggctattcctcactgggccagatccagcagatcatggccgacgtg
ctcaagttggaccgcagctttgtccagcgcaacattctcggcgcgcgggaacagatcgtg
ctcagcaacgtcatccgcatggctacggaactgggcatgtcggtcatttgcgaaggcgtg
gaaaccggggagcaggcggatatcctcatccagctgggctgccgcaacgcccagggcttt
ttttacgccaaacccatgcccaggcgggattttgaacagcttctgcaaaaaggggcccgg
ctgccggtgtaa
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