Desulfovibrio fairfieldensis: AXF13_11020
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Entry
AXF13_11020 CDS
T04293
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfi03009
]
AXF13_11020
Enzymes [BR:
dfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AXF13_11020
Ribosome biogenesis [BR:
dfi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXF13_11020
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AMD90604
UniProt:
A0A109W4L1
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All DBs
Position
complement(2604606..2605664)
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AA seq
352 aa
AA seq
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MNACELRVDAALAGQRLDQALAALTPELGLRGRRRLIARGAVLVNGRVGDAGCRLRPGDV
LALRGTEDGTGATPCSADMPRLLSRQGDYCFLYKPAGLHSAALAGDNGPSLEALLPVLLS
EESGGRAPRLMQRLDYGTSGIVCAALGAKAAQAFRVAERTGRCEKRYLALLRGTLAGPST
VRLALDTADRRQSRVLADTDDTLRWTEFLPLHVWGGAAATGPLAGLVRDTAHGESTSSAS
GAGEGEDPGGLTLAACRIRCGARHQIRAHAAALGHPLWGDGLYGRSNQHGPAGTGFFLHH
GALLLPGAACVQSPPWPLPEAQAGAVRKWLESPAQCGILRRGHRNSPDPHQP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtgcgaactccgcgttgatgctgcactggccggacagcgactggaccaggcc
ctggccgcgctgacgcccgaactggggctgcgcggccgccgccggttgatcgcgcgcggc
gcggtgctggtcaacggcagggtgggagatgcggggtgccgtttgcggccgggcgacgtc
cttgccctgcgcggcacggaggacggaacaggtgcgacgccgtgttccgcggacatgccg
cgcctgctctcccgccagggagactattgttttctgtacaagcctgccgggctgcacagc
gcggccctggccggggacaacggccccagcctggaggctctgttgcccgtcttgctgtcg
gaagagagcggagggcgtgcgccgcggctcatgcagcgcctggattatggaacttcgggc
attgtctgcgcggccctgggggcaaaggcggctcaggccttccgtgtcgcggagcggacg
ggccggtgcgaaaagcgttatctggccctgctcagagggacactggccgggccgtccaca
gtccggctggccctggatacggcggatcgccgccaaagccgtgtgctggcggacacggac
gacacgctccgctggacggaatttctgcccctgcacgtttggggcggcgcggcggcaaca
ggtccgcttgcgggcctggtccgggatacggcgcacggcgaaagtacttcttccgcgtcc
ggcgcgggcgaaggggaagatcccggcggcctgaccctggccgcctgccgcatccgttgc
ggcgcgcggcatcagatccgggcacacgcggcggccctgggccatcccctctggggggac
ggcctgtatggccggtcgaatcaacacggcccggccggaacgggattttttctgcaccac
ggggccctgctgctgcccggcgcggcctgcgtgcaatcgccgccctggccgctgcccgaa
gcccaggccggggcggtcaggaaatggcttgaaagcccggctcaatgcggtatactgagg
cgtgggcatcgcaacagcccggacccgcatcagccgtaa
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