Desulfovibrio fairfieldensis: AXF13_11865
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Entry
AXF13_11865 CDS
T04293
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AXF13_11865
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dfi01007
]
AXF13_11865
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfi03016
]
AXF13_11865
03029 Mitochondrial biogenesis [BR:
dfi03029
]
AXF13_11865
Enzymes [BR:
dfi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
AXF13_11865
Amino acid related enzymes [BR:
dfi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
AXF13_11865
Transfer RNA biogenesis [BR:
dfi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AXF13_11865
Prokaryotic type
AXF13_11865
Mitochondrial biogenesis [BR:
dfi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AXF13_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
SYY_C-terminal
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
AMD90762
UniProt:
A0A0X8JLG5
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All DBs
Position
2798335..2799531
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AA seq
398 aa
AA seq
DB search
MTDIDRQMALIKRGVAELIDEGELRKKLARGVPLRVKVGFDPTAPDLHLGHTVVMHKMRH
FQELGHTVIFLIGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKKQVFKILDPKKTQVE
FNSRWLSKLDATGFIKLASSYTVARMMERDDFEKRFREQRPISIHEFLYPLCQGFDSVSL
KTDVEMGGTDQKFNLLVGRNLQAHYGQESQCILTMPLLEGTDGVRKMSKSYGNYIGIDEP
PAEIFGKVMGVSDELMWRYYELLSAKSLEEIAALKRDVAEGRVHPKAAKEALAHEMVSRY
HSGKDADEARQGFNAVFADGGVPADAPSHSCQHGEDSTPPAFLEAAGLVKSRGEAKRLIK
EGALSVDGQRCDDALAPLPAGDYVIKLGKKRFLKLNVR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacggatattgatcggcagatggcccttatcaaacgcggcgtggctgaactgatcgac
gagggcgaactgcgcaaaaagctggcgcgcggcgtgcccttgcgcgtcaaggtgggcttt
gaccccacggctccggacctgcacctcgggcatactgtggtgatgcacaagatgcgtcat
ttccaggagctggggcacacggtcatttttctgatcggcgatttcaccggccgcatcggc
gacccttcgggccgttcggaaacccgccccccgctgacggaggaacaggttctggccaat
gccgaaacctacaagaagcaggttttcaaaatcctggacccgaaaaagacccaggtggaa
ttcaactcccgctggctgagcaagctggacgccacgggcttcatcaagctggcctccagc
tatactgtggcccgcatgatggagcgcgacgactttgaaaagcgcttccgcgagcagcgc
cccatttccatccacgaatttctctatccgctctgccagggctttgactcggtttcgctg
aaaaccgacgtggaaatgggcggcacggaccagaagttcaacctgctggtgggccgcaac
ctccaggcccattacgggcaggaaagccagtgcattttgaccatgcccctgctggaaggc
acggacggcgtgcgcaagatgtccaagtcctacggcaactacatcggcattgatgagccg
ccggcggaaattttcggcaaagtcatgggcgtgtccgacgagctcatgtggcgctattac
gagctgctttcagccaaaagcctggaagagatcgcggccctgaagcgggatgtggccgaa
ggccgcgtgcatcccaaggccgccaaggaagccctggcccatgaaatggtcagccgctac
cacagcgggaaggacgccgatgaggcccgccagggcttcaacgcggtgttcgcggacggc
ggcgtgcccgccgacgcgccctcccactcctgccaacacggcgaggacagcacgcccccg
gcctttctggaggccgccgggctggtcaagagccggggcgaggccaagcgtctgatcaag
gaaggcgcgctctcggtggacggccagcgttgcgacgacgcgctggccccgctgcccgcc
ggggattatgtgatcaaactgggcaaaaagcgctttctgaaactcaacgtgcgctga
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