Desulfovibrio fairfieldensis: AXF13_12105
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Entry
AXF13_12105 CDS
T04293
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi02020
Two-component system
dfi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXF13_12105
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXF13_12105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfi03021
]
AXF13_12105
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dfi02035
]
AXF13_12105
Transcription machinery [BR:
dfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXF13_12105
Bacterial motility proteins [BR:
dfi02035
]
Flagellar system
Flagellar assembly proteins
Stator
AXF13_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
PhyR_sigma-like
UPF0122
GerE
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AMD90805
UniProt:
A0A0X8JL55
LinkDB
All DBs
Position
2864184..2864963
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AA seq
259 aa
AA seq
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MKTGTAQAQQVSPWEALETGATAWEDFSSAEQEEVVRHYAPKIRFLALRLKSKLPRSVEL
GEMISSGTLGLMEALGKFRPQLGIRFETYAENRIRGAMLDELRRLDWFPRSLRQRVRVLD
EAMRKVEHEQGRQATEEELQDITGLELRDVRQGLEALQNQLWLSLDAIQDTLAGDGPESG
GEPYSNTALRELVERVAPLIERLTPREKLVLSLYYTDELNMRETAEIMGITEGRVSQLHS
QALGRLRKEFASLYGTAEM
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccggcacagcgcaagcacaacaggtaagtccctgggaagcgcttgaaaccggc
gccacagcctgggaggatttctcctcggcggaacaggaagaggtggtgcggcactacgcg
cccaagatccgctttctggctctgcggctcaaatccaagctgccccgcagcgtggaattg
ggcgagatgatcagctccggcactctgggcctcatggaagctctgggcaaatttcgtccg
cagttgggcatccgctttgagacctacgcggaaaaccgcatccgcggggccatgctggac
gagttgcgccgcctggactggttcccccgctccctgcgccagcgcgtgcgcgtgctggac
gaggccatgcgcaaagtggagcacgagcagggccgccaggccactgaggaggaactgcaa
gatatcaccggcctggagttgcgcgatgtgcgccagggcctggaagccttgcagaaccag
ctctggctctccctggacgccatacaggacaccctggccggcgacggtccggaaagcggc
ggcgaaccctacagcaatacggccctgcgggaacttgtggaacgcgtggccccgctgatc
gaacgcttgacgcctagagaaaagttggtactctcattatattatacagacgaattaaac
atgcgtgaaacggctgaaatcatgggtattaccgaaggccgcgtctcgcagttgcattcg
caggctctgggccgcctgcgcaaagagtttgccagtctgtacggcaccgcggaaatgtag
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