Desulfovibrio fairfieldensis: AXF13_12525
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Entry
AXF13_12525 CDS
T04293
Name
(GenBank) Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfi03000
]
AXF13_12525
Transcription factors [BR:
dfi03000
]
Prokaryotic type
Helix-turn-helix
Other families
AXF13_12525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
TPR_12
AAA_16
DUF4807
MCM
AAA
Motif
Other DBs
NCBI-ProteinID:
AMD90882
UniProt:
A0A0X8JLP7
LinkDB
All DBs
Position
complement(2970933..2973995)
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AA seq
1020 aa
AA seq
DB search
MIHDPQESLPQALAALLAVDKIRYTRQALIQLGPWPPSAVDEVLRLFAARGLARPSRSGL
WRGRAEALRAFSRERAPETTARPLLRAVASLERGAVLDGCEILLEEVRHTLDDGRCAAVL
ALLDLLLSGLRRWSGDTEEAEALRRYLSVFRSVQGISIYMGKSGQEVLDLLPRARAAAEA
LGDRRVTLMLDLTEASQRHLTRMHNTERPYALLARTLASIRELGDPDILEEASHSIGILH
FMQGAYSEALPYLETGAVSRFTAHFNYFEEARLRYIGSAACSLGLPAKAAGILLAGLREA
RLRRNRQTRKWIQTHLADDLMRMGRPDEGLALLDELLLCCDPATETTLWIWNMRSLAHYH
FLKGRVATSHRIFYASMRYCVRMGLQRPYYGFTWLFDMLWAYEWQGLPRIPGYDLEDELT
AAQQSPNRHLKGAALRIRALQARARGVDPAQVRGLLVRGLTYAKRVGSPLEIARCRLALA
YCLSRRRARQAELLFSAARTVLRRYTQYDCPDGPGGGQDAPYCPDGRSCLRRCREGLEAL
PAWSDLDAHLADMLRIVSETFEVERAALFSPDAEGPVMVRNISRLELESPTFRPVLKKAA
AVMEAASGEPARAARGTGIYLPLAVPNARPWLLFLQCEFFAGHISAQGTEIFRELGGLLA
RELQTARRLQEGMRKALYAVEERGRVAAERMAALDEPYYGTGLDDVLRQADSTAVTDAPV
LILGETGVGKDLLARRVHARSGRAGAFVPIHPASIPEQLFESELFGHEKGAFTGAWRQKL
GHLEVADGGTLFIDEVGEVPLPMQTKLLRVLQEKCFMRVGGIREIRSDFRLVAATNRDLK
SMVAQGRFREDLYYRISVVPLTLPPLRERPADIPLLARRFVEMFSRRYQRPVPPLEKEEA
ERLRAYAWPGNVRELKNVVERAVILHSGGPLHLLRPTEPPPLPAEKAAPPGTLSGLEWED
LPSLEELQRRYIRHVLRLARGRVDGEAGALRILGMKRSTLYARIRAWGLDAVSQLYGREK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgatccatgatccgcaagaatccctgccgcaggctctggccgcgctgctggccgtggat
aaaatccgctacacgcggcaggcgctgattcaattggggccctggccgccctcggccgtg
gacgaagttttgcgtcttttcgccgcgcggggcctggcgcggccgtcgcgctcggggctc
tggcggggacgggccgaggcgctgcgcgctttttcgcgtgaacgcgcgccggaaaccacg
gcgcgtccgttgttgcgggccgtggcttcgttggagcgcggagccgttctcgacggctgc
gaaatattgctggaagaagtgcggcataccctggacgacgggcggtgcgcggcggtgctg
gcgctgttggacctgctgctgtccggcctgcgccgatggagcggggacacggaagaggcg
gaggcgctgcggcgctatctgagcgtgttccgcagcgttcagggcatttccatctatatg
ggcaagagcggccaggaagttttggatttgctgcctcgggcccgcgccgccgccgaggcg
ctgggggacaggcgcgtcaccctcatgctggacctcacggaggccagccagcgtcacctg
acccggatgcacaatacggaacggccatatgccctgctggcccgtaccctggcctccatc
agggaactgggcgacccggacattctggaggaggcctcgcacagcatcggcatcctgcat
tttatgcagggcgcgtacagcgaggccctgccctatcttgaaaccggcgctgtgagccgg
ttcacagcgcatttcaactactttgaagaagcgcggttgcgctatatcggcagcgccgcc
tgcagtctgggccttccggccaaggctgcgggcattctgctggccgggctgcgcgaagcg
cggctgcgccgtaaccgacagacgcggaaatggattcagacccatctggccgacgatctc
atgcgcatggggcggcccgacgagggccttgccctgctggatgagcttctgctctgctgc
gacccggccacggaaaccactctgtggatctggaacatgcgctcgctggcgcactatcat
tttctgaaagggcgcgtcgcaacctcgcacaggattttttacgccagcatgcgctattgc
gtgcgcatggggctccagcgtccctattacggcttcacctggctgtttgatatgctttgg
gcctatgaatggcagggcctgccccggattccgggctatgatcttgaagatgagctgacg
gccgcgcagcaaagccccaaccgccatctcaagggcgcggccttgcgcatccgggctttg
caggcacgcgccagaggggtggacccggcccaggtgcgcggcctcctggtgcgcggcctg
acctatgccaagcgggtgggcagtccgctggagatcgcccgctgccgcctcgccctggcg
tattgcctttcgcggcggcgcgcccgccaggccgagcttctgttttcggcggccagaacc
gtgttgcggcgctatacccagtatgactgccctgacgggcccggcggcgggcaggacgcg
ccttactgccccgacggccgaagctgcctgcgccgctgccgggaaggactggaggccctg
cccgcctggtcggatctggacgcccatctggccgacatgctgcgcatcgtcagcgagacc
tttgaagtggagcgggcggccctgttcagcccggacgccgagggaccggtcatggtgcgc
aatatctcgcgcctggagctggaaagcccgaccttccgcccggtgctgaaaaaggccgcc
gccgtcatggaggcggcttcaggcgaacccgcgcgcgccgcgcggggcacaggaatatat
ctgcctctggcggttcccaatgcccgcccgtggcttctttttctgcaatgcgagtttttc
gccggccacatcagcgcccaaggcacggaaatattccgcgagctgggcggcttgctggcg
cgggagctgcaaaccgcccggcgtttgcaggaaggcatgcgcaaggccctgtatgccgtg
gaagaacggggccgcgtggccgccgagcgcatggccgccctggatgagccctactacggg
accgggctcgacgacgtgttgcgccaggcggacagcacggccgtcaccgacgcgccggtg
ctcattctgggagaaaccggcgtgggcaaggatctgctggcccggcgcgtccacgcgcgc
agcggccgggccggagcctttgtgcctattcatccggccagcattccggagcagcttttt
gaaagcgaactcttcgggcatgaaaagggtgcgtttaccggagcctggcggcagaagctg
ggccatctggaagtggcggacggcggcacgctgtttatcgacgaagtgggtgaggtgccc
ctgcccatgcagaccaagctgctcagggttttgcaggagaaatgctttatgcgggtgggc
ggcatccgcgagatccgttctgatttccggctggtggcggccaccaaccgggacctcaaa
agcatggtggctcaaggacgcttccgggaagatctctactatcgtatttccgtggtgccc
ctcaccctgccgcccctgcgcgagcgtcccgccgacattcccctgctggcgcggcgcttc
gtggagatgttcagccgccgttaccagcgccccgtgcctcccctggaaaaggaagaggcg
gaacgcctgcgcgcctatgcctggcccggtaatgtgcgggaactgaagaacgtggtggag
cgggcggtcatcctccactccggcggccctctgcatctgttgcgccccacggaaccgccg
ccgcttccggcggaaaaggcagctccgcccgggacgctttccggtctggaatgggaagat
ttgccgagcctggaagaattgcagcgccgctacatccgccatgtgctgcgtcttgccaga
ggccgcgtggacggcgaggccggggccctgcgcatcctcggcatgaagcgttcgaccctg
tatgcgcgcatccgggcctggggcctggacgcggtttcgcagctttacggcagggagaaa
tag
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