KEGG   Desulfovibrio fairfieldensis: AXF13_13645
Entry
AXF13_13645       CDS       T04293                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
dfi  Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfi03032]
    AXF13_13645
   03400 DNA repair and recombination proteins [BR:dfi03400]
    AXF13_13645
Enzymes [BR:dfi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AXF13_13645
DNA replication proteins [BR:dfi03032]
 Prokaryotic type
  DNA Topoisomerases
   AXF13_13645
DNA repair and recombination proteins [BR:dfi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AXF13_13645
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AMD91081
UniProt: A0A120KMD8
LinkDB
Position
3248204..3250777
AA seq 857 aa
MSEAQDGQHPQINIEKELRQSYLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQYELANNY
NRPHKKSARIVGDVIGKYHPHGDSAVYDALVRLAQEFSMRDPLVDGQGNFGSIDGDSAAA
MRYTEVRMSRLAQEFLGDLDKNTVDFRPNYDNTLQEPSVMPTKVPNLLLNGSSGIAVGMA
TNIPPHNLGELCDALQLLLDNPQCSVDDLMEYVKGPDFPTAGFVYAGKGLYDAYHTGRGT
VKMRGRVEIEERKKGLQSVVIREIPFGLNKSSLVEKIAALVNDRKIDGIADLRDESDRKG
IRIVIDLKRGVIPDIVVNALYKFTPLESSFGINMLAVVDNRPVLLTLKSALSCFVDHRRE
VVIRRTRYDLEKAEARAHILEGLRIAIDHIDQVVALIRASANPEEARQGLMETFELSEIQ
ARAILDMRLQRLTGLQREELLAEYKDLLQKIEFYKSVLDNSEVLRSEMKREIREIRETFV
TPRRTEVLTEALGGIDIEDLIPDDEVVITLSRRGYMKRTNLENYQQQKRGGKGIAALHTS
DDDYVQEFLTTTNHQYLCLFTNKGRMHQLKVHQVPEGSRTAKGVHINNLLPLEEGEWVTT
VLALREFAEDKYFLFVTRRGMVKRSSASLYARCRKTGLMAVGLREDDELVVVRPIREDNH
IVLATADGFAIRFSCGDIRPMGRVATGVKGIALRRQDSVVAGVVLKDVDQTTEIMSISAN
GYGKRTRVDLYRLQSRGGKGIINFKVTAKTGPVVGAMPVRDNDGLILLTSANKIVRIGVD
EVRSKGRATMGVMLVRLDEGARVVGFDRVDEGGQIVRDLSVELDEADGMPSVASASDSAD
GRGSKPDAEPNQDGDED
NT seq 2574 nt   +upstreamnt  +downstreamnt
gtgtctgaagcgcaagacggacagcatccgcaaatcaacatagaaaaagaactccgccag
tcctatctggagtactccctttcggtcatcatcgggcgcgccattccggacgcccgtgac
ggcctgaagcccgtgcaccggcggatcatgttcgcccagtacgagctggcaaacaattac
aaccgcccgcacaagaagtccgcgcgcatcgtcggcgacgtcatcggtaaatatcacccg
cacggcgattcggcggtctatgacgccttggtgcgcctggcgcaggaattttccatgcgc
gatcccctggtggacggccagggcaacttcggctccatcgacggcgactctgcggcggca
atgcgctacacggaagtgcgcatgtcccggctggcccaggaattcctgggcgacctggac
aagaataccgtggatttccggcccaactacgacaataccctgcaggaaccctcggtgatg
cccaccaaggtgcccaatctgctgctcaacggttcgtcgggcattgccgtgggcatggcc
accaatattccgccgcacaacctgggcgaactctgtgacgcgctgcagcttctgctggac
aatccccagtgcagcgtggacgacctcatggagtacgtgaaggggccggacttccccacc
gccggttttgtctacgcgggcaagggactgtacgacgcctaccatacgggccggggcacg
gtaaaaatgcgcggccgggtggaaatcgaggagcgcaaaaaaggcctccagtccgtggtc
atcagggaaattccctttggcctgaacaaatccagcctggtggaaaaaatcgcggccctg
gtcaatgaccgcaagatcgacggcattgcggatttgcgcgatgaatcggaccgcaagggc
atccgcatcgtcattgacctcaagcgcggcgtgattccggatattgtggtcaatgccctg
tataaattcacgcccctggaatccagcttcggcatcaatatgctggctgtggtggacaac
cggccggtgctgcttactcttaaaagcgcactgagctgctttgtggaccaccggcgcgaa
gtggtcattcgccgtacccgttacgatctggaaaaagccgaagcccgggcccatattctg
gaaggtctgcgcatcgccatagaccatatcgaccaggtggtggccctgatccgcgcatcg
gccaatcctgaggaagcccgccagggcctcatggaaaccttcgagctgtccgaaattcag
gccagggccattctggacatgcgtctgcaacgcctcaccggtttgcagcgcgaggaactg
ctggccgaatacaaggatctgctccagaaaatcgaattctataagtccgtgctggacaat
tcggaagtgctgcgcagcgagatgaagcgcgagatccgcgagattcgggaaacgttcgtc
acgccccggcgcacggaagtgctcaccgaggccttgggcggcatcgacatcgaggacctg
atcccggacgatgaggtggtcatcaccctgtcccgccgcgggtacatgaagcgcaccaat
ctggaaaattaccagcagcagaagcgcggcggcaagggcattgcggccctgcacacctcg
gacgacgattacgtgcaggaattcctgaccaccaccaatcaccagtatctctgtctgttc
accaacaaaggccgcatgcaccagctcaaggtgcatcaggtgcccgagggcagccgcacg
gccaagggcgtgcatattaacaatctgctgccgctggaagagggcgagtgggtcaccacg
gtgctggccctgcgcgagtttgccgaggacaagtatttcctctttgtgacccggcgcggc
atggtcaaacgctcttcggcctcgctctatgcccgctgccgtaaaaccggactcatggcc
gtgggcctgcgcgaggacgacgagctggtggtggtgcggcccatccgcgaggacaatcac
attgtactggccacggcggacggctttgccatccgcttttcctgcggtgacatccggccc
atgggtcgggtggccactggggtcaagggcattgccctgcgccgccaagacagtgtggtg
gccggggtggttctcaaggatgtggatcagaccacggaaatcatgtccatttcggccaac
ggctacggcaagcgcaccagggtggatctttaccgccttcagtcgcgcggcggcaagggc
atcatcaacttcaaggtcacggccaagacaggcccggtggtgggcgccatgcccgtgcgg
gataacgacggcctgatcctgctgacctcggccaacaagattgtgcgcatcggcgtggac
gaggtgcgcagcaagggccgggccaccatgggcgtgatgctggtacgcctggacgaaggc
gcgcgcgtggtgggctttgaccgtgtggacgagggcggccagatcgtacgtgatctcagc
gtggagctggatgaggcggacggcatgccttccgttgcctccgcctctgattccgccgac
ggccgtggctcgaagccggacgcggaaccgaatcaggatggtgatgaggactaa

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