Desulfovibrio fairfieldensis: AXF13_14385
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Entry
AXF13_14385 CDS
T04293
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfi
Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfi03009
]
AXF13_14385
Enzymes [BR:
dfi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AXF13_14385
Ribosome biogenesis [BR:
dfi03009
]
Prokaryotic type
ribosomal protein modification factors
AXF13_14385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AMD91219
UniProt:
A0A120KNI1
LinkDB
All DBs
Position
3414302..3415621
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AA seq
439 aa
AA seq
DB search
MSIHTPTKALPVWSLSLGCPKNRVDSERLLGSLGLPVKSVSQMGRARLVFINTCGFIAPA
VRESVRAVLDAVNRLARCKNKPLLAVAGCMVGRYGAEELARELPEVDLWLPTGDLADWPV
MLARALNLPEGAGSGGRLLSTGPSYAWLKIGEGCRHNCAFCTIPSIRGGLRSEPVPGLLA
EARGLLEQGVRELVLVAQDVTAWGGDLAGKKSLLHLLEGLLGLDGLAWLRLLYLYPSGVT
PELLRFMKESGGPLLPYLDIPLQHAHPEVLARMGRPFAGDPRRVLDRVRDALPEAAVRTT
FIVGYPGESEAHFDSLCRFVEESRFQNLGVFAYQAEEGTKAAELPDQVPEESRERRRATL
MEIQAGISESLLAERVGQRLPVLVDAPHPEWPGLHSGRVWFQAPEVDGMTYVSGPGVAPG
ALVECDIVENTEYDLTALA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccataccccaacgaaagccctgccggtctggtccctgagcctgggctgtccc
aaaaaccgggtggacagcgaacgtctgctgggttccttgggcttgcccgtcaaaagcgtg
agccagatgggccgggcgcgcctggtcttcatcaatacctgcggcttcatcgctccggcg
gtgcgcgagtccgtgcgggccgtgctggacgccgtgaaccggctggcccggtgcaagaac
aaacccctgctggccgtggccggttgcatggtggggcgttacggcgcggaggaactggcc
cgggagctgcccgaggtggacctctggctgcccaccggagacctggcggactggccggtc
atgctggcacgggccctgaatctgccggaaggggccgggagcggaggccgcctgctttcc
accgggccgtcctatgcctggctcaagatcggcgagggctgccgccataactgcgctttc
tgcaccatcccgtccatccggggcggcctgcgctccgaacccgtgcccggcttgctggcc
gaggctcgcggcctgctggagcagggagtgcgcgaactggtgctggtggcgcaggacgtc
acggcctggggcggggatctggccgggaagaaaagccttttgcatctgttggaaggattg
ctgggcctggacggcctggcctggctgcgcctgctctatctctaccccagcggggtcacg
ccggaactgctgcgttttatgaaggaatccggcggcccgctgttgccttatctggatatt
cctctccagcacgcccacccggaggtactggcccgcatggggcggccctttgccggtgat
ccccggcgcgtgctggaccgggtgcgcgacgcgttgccggaagccgccgtgcgcaccacc
ttcatcgtgggctatcccggcgaaagcgaagcgcatttcgacagcctctgccgttttgtg
gaggaaagccgtttccagaatctgggcgtattcgcctatcaggccgaagaaggcaccaaa
gccgctgaactgccggatcaggtgccggaagagagcagggagcgccgccgcgccacgctg
atggagatccaggcgggcatcagcgaaagcctgctggcggagcgtgtggggcaacgcctg
cccgtgctggtggacgcgccgcatccggaatggcccggtctgcacagcggccgggtctgg
ttccaggccccggaagtggacggcatgacctatgtcagcggccccggcgtggctcccggc
gcgctggtggagtgcgacatcgtggagaatacggagtacgatctgacggcgctggcctga
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