Desulfovibrio falkowii: ACF3NB_08065
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Entry
ACF3NB_08065 CDS
T11754
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dfk Desulfovibrio falkowii
Pathway
dfk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACF3NB_08065 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfk03400
]
ACF3NB_08065 (uvrA)
DNA repair and recombination proteins [BR:
dfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACF3NB_08065 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACF3NB_08065 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_25
AAA_16
nSTAND1
AAA_23
AAA_21
RsgA_GTPase
AAA_33
AAA_18
AAA_22
nSTAND3
NACHT
DUF8106
DnaJ_CXXCXGXG
Rad17
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
XID82978
LinkDB
All DBs
Position
complement(1859153..1862113)
Genome browser
AA seq
986 aa
AA seq
DB search
MNTSTNKSCIHIEKARQHNLKNISLDIPRDELVVICGPSGSGKSTLAFDIVYAEGQRRYV
ESLSAYARQFLPQMDKPDVEKIEGLSPAISLEQQSVSRNPRSTVGTVTEIYDFLRVFFAR
LGRMYCPQCGRPIEARAADEIIADILALPQGTKFMVLAPLVELQKGTHQDKFKKLKAEGF
ARVRVNGAFHTLDDVPALDKNKKHSIDLVVDRLVNKEGLRGRLADSVELALRYGEGRLVI
HLPDRAAAGEEADTVHSTSSVCTHCRISLPAPSPQLFSFNGPQGACPRCVGLGGVDYFEP
RLVAPNMGLSLNTGVLLPWATGKMFSRYEEALKALGKRFRFSLSTPLEEFSEDALAALFY
GEDEHGRPARSSQGLRRNWMGGNVALGAGGDYQSEHFTEARSAGDVSVTAKRWPGVIPLL
ESGMQYGDAWREALSRYRQTMDCPDCKGARLNVNALSVRVDDLNIADFCNLSVERALEWL
DRRTFTGRHVVIAEPLMKELTHRLSFMRSVGLEYLSLGRSMSTLSGGEAQRIRLASQLGS
GLVGVTYVLDEPSIGLHPRDNERLLGTLRSLQARGNTVLVVEHDEATICEADTVIELGPG
SGAHGGDIMFQGKVDDLLSQADTLTARYLRGDDTIALPDARREPQGELVLHNVTTNNLRN
VECRIPLGVLTCVTGVSGSGKSSLVVDTLYKHLALNLGLRVDQPGTIGGLAYEGGAAPVE
RIVAIDQTPIGRTPRSNPATYTKIFDEIRNIFSMTQDARKRGYKPGRFSFNVRGGRCEAC
GGDGQIRVEMHFLPDVYVTCDVCKGKRYNHETLEVRYKGLNIAEVLNLTVRQARELFENY
PALERRLAVLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTMYILDEPTTGL
HMHEVGKLIKVLHALVDKGASVVVIEHNTDMILASDHVLDMGPGGGENGGLIVSAGTPEA
IVADPQSVTGRFLMQERLDRIKRRKS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccagcaccaacaagtcctgcatacatatcgaaaaggcccgtcagcacaacctt
aaaaacatcagcctggacatcccgcgggatgagctggtggtcatttgcgggccttcaggc
tcgggaaagtccactctggcctttgacatcgtgtacgccgaggggcagcgccgctatgtg
gagtccttatcggcctacgcccgtcagtttctgccccagatggacaagcccgatgtggaa
aaaatagaagggctttcacccgccatttctcttgagcagcagagcgtttcgcgcaatccg
cgctctaccgtgggtacggtgacggaaatttacgactttctgcgcgtttttttcgcccgg
ctggggcgtatgtactgcccccagtgcggccggcccatcgaagcccgcgctgctgatgaa
atcatcgctgatattcttgccctgccccagggtacaaaatttatggtgctggcccctctt
gtggaactgcagaaaggtacgcatcaggacaagtttaaaaaactcaaggcggaagggttt
gcccgtgtgcgcgtcaatggggcctttcacacgctggatgacgtgcccgctctcgataaa
aacaaaaaacacagcattgaccttgtggtggaccgtctggtcaataaagagggcctgcgc
gggcgtctggccgactcggtggagctggccctgcgctacggcgaagggcggcttgtaatc
cacctgcccgacagggctgccgccggtgaagaggccgacaccgtgcactccacctcatct
gtgtgcacgcactgccgtatttccctgcctgcgcccagtccccagcttttttcttttaac
ggcccgcaaggggcctgcccgcgctgcgtgggccttggcggggtggactatttcgagccg
cgcctggtcgcacccaatatggggctttcgctgaacacgggagtgcttctgccctgggcc
acgggcaagatgttcagccgttatgaagaggcgctcaaggcgctgggcaagcgtttcagg
ttcagcctgtccacaccgctggaagaattttctgaagacgccctggctgcgcttttttat
ggcgaggacgaacacggcagacctgcgcgttcttctcagggcctgcgccgtaactggatg
ggcggcaatgtggccctgggggccggcggcgactaccagagcgagcattttaccgaggcc
agaagtgccggagatgtaagcgtaactgcaaaacgctggcccggcgtgattcccctgctg
gaaagcggtatgcagtacggcgatgcctggcgcgaagcgctttcacgctaccgccagacc
atggactgcccggactgcaagggcgcgcggctcaatgtcaacgcgctttcggtgcgtgtg
gacgatctgaatattgcggatttttgcaatctttcggtggagcgcgccctggaatggctg
gacaggcgcacgttcacggggcgccatgtggttattgccgagccgctcatgaaagagctg
acccaccgtttgtccttcatgcgcagcgtggggctggaatatctttcgctggggcgctcc
atgtccaccctttccggtggcgaggcgcagcgcatccggctggcaagccagctcggctcc
ggccttgtaggggtgacctatgtgctggacgagccgtccatcggtctgcatccgcgcgac
aatgagcggctgctgggtacgctgcgctcgcttcaggcacgtggcaatacggtgctggtg
gtggagcatgacgaggccaccatctgcgaggctgatacggttatcgagcttggtcccggt
tccggtgcgcacggcggggacatcatgtttcagggcaaggtggacgatctgctttctcag
gcagatacgctgacggcccgctatctgcgtggcgacgacaccatcgctctgcccgatgcc
cggcgtgagccgcagggcgagctggtgctgcacaacgtgaccaccaacaacctgcgcaat
gtggaatgccgcattccccttggcgtactgacctgcgtgacgggcgtttccggctcggga
aaaagctcgctggtggttgatacactctacaagcatctggccctgaacctgggcctgcgc
gtggaccagcccggcaccatcggcggcctggcatatgagggcggggctgcccctgtggag
cgaatcgtggcgatcgaccagacgcccatcggacgtaccccgcgctcgaacccggccacc
tatacaaaaatatttgacgaaatacgcaatattttttccatgacgcaggacgcccgcaaa
cgcggctacaagccggggcgtttcagctttaacgtgcgcggcgggcgttgcgaagcctgc
ggcggcgatgggcagatacgggtggaaatgcactttttgcctgacgtttacgttacctgt
gacgtgtgcaagggcaagcgctataatcacgaaacccttgaggtgcgctacaagggcctg
aatatcgctgaggtactcaaccttaccgtgcggcaggccagggaactgtttgaaaactat
cccgcgctggagcgtcgcctggcagtgctggaagaagtggggctggaatacctgcggctc
gggcagcccgccaccacactttccgggggcgaggcccagcgcatcaagatctcgcgcgaa
ctgggcaagcgttccctgcccggaaccatgtacatcctggacgaaccgaccacgggcctg
cacatgcacgaagtgggcaagctcatcaaggtgctgcacgctctggtggacaagggagcc
agtgtggtggtcatcgagcataataccgacatgattctggcttcggatcatgttcttgat
atgggaccgggcggtggagaaaacggcgggctgattgtttccgcaggtacccccgaggcc
atcgtggctgacccccagtccgtcaccgggcgttttcttatgcaggaacggctggacagg
ataaagcggcgcaaaagctga
DBGET
integrated database retrieval system
