Desulfovibrio ferrophilus: DFE_0416
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Entry
DFE_0416 CDS
T05829
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DFE_0416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfl03021
]
DFE_0416
03400 DNA repair and recombination proteins [BR:
dfl03400
]
DFE_0416
Enzymes [BR:
dfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DFE_0416
Transcription machinery [BR:
dfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DFE_0416
DNA repair and recombination proteins [BR:
dfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DFE_0416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RAD51D_N
DUF6268
Motif
Other DBs
NCBI-ProteinID:
BBD07142
UniProt:
A0A2Z6AV70
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All DBs
Position
452796..453839
Genome browser
AA seq
347 aa
AA seq
DB search
MIIQDGDKLINTRNWSELVKPEQVVRDGKSNTQYGKFVCEPLERGFGTTIGNALRRVLLS
SLQGAVIVSANIEGIQHEFTTMDGVIEDVTDIVLNLKQVRFAMNTEEPQRLTLEANKKGV
VTAAAIKENQRVTVLNKDQHIATLSEDIKLRMDIEVQMGKGYVPAEMSEGQSDEIGMIRL
DASFSPVKKVAYAIEQARVGQMTNYDKLILEIWTDGSVTPEDAVAYSAKILKEQLTVFIN
FDEQSSDEEQANSVSGEDLNPSLFKGIDELELSVRATNCLKSASIRTVGELVQRTEAEML
KTKNFGRKSLDEIRRILSDMDLGFGIVVESFQEHYEEWLKRKESDEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatcatccaagacggcgacaaactgatcaatacgcgcaactggtccgagctggtcaaa
cccgaacaggtcgttcgcgatggcaagagcaatacgcagtacggcaagttcgtgtgcgaa
ccgcttgagcggggcttcgggaccaccattggcaatgcgctcagacgcgtacttctgtcc
tctttgcagggcgcagtcattgtgtcggcgaacatcgaaggcattcagcacgagttcacc
accatggacggcgttatcgaagatgtgaccgatatcgtactcaacttaaagcaggtgcgc
ttcgccatgaatacggaggagccgcagcgcctgactcttgaggcgaacaagaagggcgtt
gtcaccgccgccgccatcaaggaaaaccagcgtgtgaccgtgctcaacaaggaccagcac
atcgcgactctgtccgaggacatcaaacttcgtatggatattgaagttcagatgggcaag
ggctatgtgccagccgagatgagcgaaggtcagtccgacgagattggtatgatccgtttg
gatgcgagtttctcgccggtcaagaaggtggcgtatgccatcgagcaggcacgcgtcggt
cagatgaccaactatgacaagctgatccttgaaatatggactgatggttcggtgacccct
gaggatgccgttgcctacagcgccaagattctgaaagaacagctgaccgtgttcatcaac
ttcgacgagcagtcctcggacgaggaacaggccaactccgtttctggagaagacctgaac
cccagtctgttcaagggcatcgacgagttggagctgtccgtccgtgcgacgaactgcttg
aagagcgccagcatccgtaccgttggcgaactcgtgcagcgtactgaggctgagatgctc
aagaccaagaacttcggtcgcaagtctcttgatgagattcgtcgaatcctgtccgatatg
gacctcggatttggcatcgttgtcgagagctttcaggaacactacgaggaatggctgaag
aggaaagaaagcgatgaggcataa
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