Desulfovibrio ferrophilus: DFE_0847
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Entry
DFE_0847 CDS
T05829
Name
(GenBank) RNA polymerase sigma 54 subunit RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl02020
Two-component system
dfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DFE_0847
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DFE_0847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfl03021
]
DFE_0847
Transcription machinery [BR:
dfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DFE_0847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_21
Motif
Other DBs
NCBI-ProteinID:
BBD07573
UniProt:
A0A2Z6AWK8
LinkDB
All DBs
Position
912385..913842
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AA seq
485 aa
AA seq
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MGLELRQQLKLSQQLVMTPQLQQAIKLLQLSRFELLDMVQQELLENPLLEEKPEEEAVER
PAEEQAAPTKEETYNDESVEQDLAKTAEWESYLGEFSSTAKQAVGREYETPEEGMSFEAR
LSAKPSLESHLDWQLRLSGASELDVQIGEQIIGNLDGLGYLRATAEEIADQLEHMPVSVQ
ATSAEVESVILRMQRFDPLGVAARDPRECLLVQLDAYNMDDPILVSLVSEHLEDLEKRRY
KPIARKFKISMEELKEYLDVIQTLDPMPGSSFAGSEPQYVSPDVFVYEYDGEFVIVLNEE
GLPRLQVSPYYVDSVKTTNSKDKEYMQDRMRSAVWLMKSLYQRQRTLYKVMESIVRFQEE
FFRHGVKKLKPLILKDVADDIEMHESTISRITTSKYVSTPHGVHELKFFFNSALGLDDGS
QVGSESVKAMIKGYIGSENPRKPLSDEKIAEMLKGELQVNIARRTVAKYRSALGILSSSK
RKQIF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaactcaggcagcagctcaaactttcacagcagttggtcatgacgccacag
ctgcagcaagcgatcaagctgttgcaactgtcacgttttgaattgttggacatggtccag
caggagttgcttgagaatccgctgctggaggagaagcccgaggaagaggctgtggaacgc
cctgcagaggagcaggccgcaccgaccaaggaagagacttacaacgacgaatccgttgaa
caggacctggccaagacggctgagtgggaaagctatctgggcgagttttcatccacggcc
aagcaggcggtgggacgtgagtacgagacaccggaagagggcatgtcctttgaggcccgt
ctgtctgccaagccttcccttgagagtcaccttgattggcagctcaggctttccggtgcc
tctgagctggatgttcaaattggtgagcagattatcggtaatctcgatgggcttgggtat
ctgagagccactgccgaagaaattgcagatcagttggagcatatgcctgtgtctgtgcag
gcgacctctgccgaggtggagtccgttattctgcgcatgcagcgttttgaccccttgggt
gttgccgcacgcgatccgcgtgaatgcctactggtgcagctggatgcctataatatggat
gaccccattcttgtctcgctggtttccgagcatcttgaggatctggagaagcgccgctac
aagcctattgcccgcaaattcaagatttcaatggaagaactcaaggaatatctggatgtt
attcagaccttggaccccatgcccggatcgtcttttgccgggagcgagccgcagtatgtg
agcccggacgtgttcgtctacgaatacgatggtgaattcgttatcgtcctgaatgaagaa
ggactcccccgattgcaggtcagcccctattatgtggattccgtcaagaccacaaactcc
aaagataaagaatacatgcaggacaggatgcgttctgcagtctggctgatgaagagcctg
tatcagcgccagcggacgctctacaaggtcatggagagtatcgtcaggtttcaggaagag
tttttccgccacggggtgaagaaactgaagccgctgatcctgaaggatgttgcggacgat
atagagatgcatgaatccaccatcagtcgcatcaccaccagcaagtacgtctctactcct
cacggtgtgcacgagcttaaatttttcttcaatagtgctttggggttggatgatggctct
caggtgggtagcgaatccgtcaaggccatgatcaagggctatatcggaagcgaaaatccc
cgcaagcccttgtcagacgagaaaatcgccgaaatgctcaaaggcgaacttcaggtcaac
attgcccgccgtacggttgccaagtatcggagtgcgttgggcattctttcctcgtccaag
cgcaagcagattttttag
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