Desulfovibrio ferrophilus: DFE_0952
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Entry
DFE_0952 CDS
T05829
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DFE_0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfl03400
]
DFE_0952
DNA repair and recombination proteins [BR:
dfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DFE_0952
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_23
AAA_22
AAA_14
AAA_27
AAA_29
Rad17
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBD07678
UniProt:
A0A2Z6AWV5
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Position
complement(1022680..1025337)
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AA seq
885 aa
AA seq
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MSTKKLTPMFEQYLSIKEEYPDCLLFYRMGDFYELFFEDAEIAARELQIALTARNKQADN
PVPMCGVPHHSYEGYVAKLLEKGFKIAMCNQVEDPREAKGLVKREVTRVLTPGTVVEDQN
LGSQAANYLASIFYDSDKGAGGLAWADVSTGEWSGLFSTREDQLWQWLIKIGPSEVLMPH
EHEVPKEYSGFEARTNRLPIRSHFDLNAAARNLCAAQGVADLEALDLADKPQLAQACGSI
LVYLRQTQKAEDVPLAPFKPLNLSRHLLLDEVTERNLEIFQRLDGGRGRGTLWGVINQSM
TPMGARLLAERLRRPWKDAAPINKTLDAVTLFVEREDLREELRTLLDRVYDVERLATRIF
LNRATPKDFIALRESLTAVPQVKALISQAGEQAELPTAPKQLLSGWDGLEDYAELLTRAL
ADSPPHLITEGGLFNRGYHPDLDELINLTDDGEARIKELLDAERESSGLEKLKLGFNKVF
GYYFELSKALIDKAPYHFERKQTLVNAERFITPQLKELEDRILHASDKRKDLEYKLFNEL
RESVASARHRFMDMASRLAALDYWQGLAHAARRHDWTRPELTTDLDMTIKSGRHPVVEAV
QGAGGYIPNDLTLTADKRVLLITGPNMAGKSTVLRQAAIISIMAQIGSYVPAASATLGLT
DRIFSRVGASDNLAQGQSTFMVEMMETARILRQAGKRSLVILDEIGRGTSTFDGLALAWS
VVEELASRGDGGVRTLFATHYHELTVLESEIPAVANFNIAVKEYKGDIVFLRRMVPGPSD
RSYGIEVAKLAGVPRSVVSRAKEILGDLEARAGGTRSLMALRAPAQQSVLPGLGSATAQP
APQAELPAEAKAFAEELSSLEVDRLTPIEALNFLHTWKSVNLKKD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaaaaaaactgacccccatgttcgaacagtacctctccatcaaggaggagtac
cctgattgcctgctcttttatcggatgggcgatttctatgagctgttcttcgaggacgct
gaaatcgctgcccgtgaattgcagattgccctgaccgcccgcaacaaacaggccgataac
cccgtgcccatgtgtggcgtcccccaccattcctacgaaggctatgtggccaagctcctg
gaaaagggcttcaagatcgccatgtgcaatcaggtggaggatccgcgcgaggccaaggga
ctcgtcaaacgcgaagtcacccgggttctgacccccggcacggtggtggaagatcagaat
ctgggctcccaggcagccaactatctggcctccattttctacgacagtgacaaaggcgca
ggcggtctggcctgggccgatgtctccaccggggaatggtccggactcttctctactcgt
gaagatcagctatggcagtggcttataaagattggtcccagcgaagtcctgatgccccac
gaacacgaggtgcccaaggaatattccggcttcgaagcccgtaccaaccgcctgcccatc
cgctcgcatttcgacttgaacgctgccgcgcgcaacctctgcgctgctcagggcgtggcc
gaccttgaagcgttggacctggcagacaaaccccaactggctcaggcctgtggatcaatc
ctggtctatttgcgccagacccagaaagccgaagatgtaccactggctccattcaaaccg
ctgaatctgtctcggcatctgctcctggacgaggtcaccgagcgcaacctggagattttt
caacgcctggatggcggccgtggtcgaggtactctgtggggcgttatcaaccagtccatg
accccaatgggcgctcgcctgctggctgaacgcctgcgcagaccgtggaaagacgccgcc
cccatcaataaaactctggatgcggttacactttttgttgagcgtgaagacctgcgcgaa
gagctgcgcacattgctggacagagtgtatgatgtggaacgactggcaacacgcatcttc
ctaaaccgagccacgcccaaggatttcatcgccctgcgtgaatcgctgaccgccgtacca
caagtcaaggcgctgatcagccaggccggtgaacaggcagaactgcccacagcccccaag
cagttattatctggttgggacggcctggaagattacgcagagttgctgacacgcgctctg
gcggacagtccccctcatctgattaccgaaggtgggctgttcaatcgggggtatcacccc
gatctggatgaattgatcaacctgaccgacgatggtgaagcccgcatcaaggaactcctt
gacgcagaacgcgaatcctcgggactggaaaagctgaagctcggcttcaacaaggttttc
ggctattatttcgaactatccaaagcccttatagacaaggcgccgtatcatttcgaacgc
aaacagactctggtcaatgccgagcgattcatcactcctcaattgaaggagttggaggat
cgcatcctgcatgcctcggacaaacgcaaagacttggaatacaagcttttcaacgaactg
cgtgaaagtgttgcatcggcccggcacagatttatggacatggcctctcgattggccgcc
ctggactactggcaagggctggcccacgctgcacgccgtcacgattggacccggccagaa
ctgaccaccgatctggatatgaccatcaaatccggacgacacccggtcgtggaagcggtg
cagggagccgggggctatatccctaatgacctgactctgactgccgacaagcgcgttctg
ctgattaccggccccaacatggctggtaaatccaccgttctgcgccaggccgccatcatc
tcgatcatggctcaaatcggcagttacgtgcccgcagccagcgccaccttgggcctgaca
gatcgaatcttctcccgggtgggtgcttcagacaatcttgcacagggccaatccaccttc
atggtggaaatgatggaaaccgctcgtatcctacgccaggcgggaaaacgcagcttggtg
attctggatgaaatcgggcgaggcacctccacttttgatgggctggccctggcttggtcc
gtggtcgaagaactggcttcacgcggagacggtggagttcgcaccctgtttgctacccac
taccacgaactgaccgtgctcgaatccgaaattcccgccgtggccaacttcaatatcgcg
gtcaaggaatacaagggcgatatcgtcttcctgcggcgcatggttcccggcccatctgac
cgcagctacggtatcgaggtcgccaagctggctggagtaccacgttccgtggtttcccgc
gccaaggaaatcctcggtgatctggaagcccgcgcaggtggcactcgctcactcatggcc
cttcgtgcaccggcacaacaatccgtgctgccaggattggggtctgccactgcccaacca
gccccgcaggctgaactccctgccgaggccaaggcctttgccgaggagttaagctccctt
gaggttgaccgcttgacccccattgaggcattgaatttcctacacacatggaaatccgtg
aacctgaagaaggactga
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